DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment bsf and AT5G55840

DIOPT Version :9

Sequence 1:	NP_523596.2	Gene:	bsf / 35100	FlyBaseID:	FBgn0284256	Length:	1412	Species:	Drosophila melanogaster
Sequence 2:	NP_001331238.1	Gene:	AT5G55840 / 835678	AraportID:	AT5G55840	Length:	1136	Species:	Arabidopsis thaliana

Alignment Length:	1018	Identity:	202/1018 - (19%)
Similarity:	337/1018 - (33%)	Gaps:	356/1018 - (34%)

- Green bases have known domain annotations that are detailed below.

  Fly   127 IWKTLNAL---NVPMDISHYNALLRVYLENEHGFAPTDFLAE-IEAKGIEPNRVTYQRLIARYCQ 187
            :|..|..:   .:..|::.:|.|:.| |..|..|..:.:|.: :|..|..|..|||..::..||:
plant   217 VWSFLKEMLKRKICPDVATFNILINV-LCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 280

  Fly   188 QGDIEGATRILEFMRAKSLPVNENVFNSLILGHSQANDLESAKG--ILGVMMQAGLEPSADTYTT 250
            :|..:.|..:|:.|::|.:..:...:|.||  |........|||  :|..|.:..:.|:..||.|
plant   281 KGRFKAAIELLDHMKSKGVDADVCTYNMLI--HDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNT 343

  Fly   251 LLCAFARHGDLAAVKETLAECEQKEI--------ILLD--------KDLLDIVYTLTVNGNGEHV 299
            |:..|:..|.:....:.|.|.....:        .|:|        |:.|.:.|.:...|
plant   344 LINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG----- 403

  Fly   300 DDVLTKLRLSPGFNQDAVNVILRLVNKGHEDVGLKLLRVMPRSSRVNGEPVDVGAFFIRQMVKAN 364
               ||...:|.|       |:|..:.|..|   ..|.|......:.||  |.||......|:.
plant   404 ---LTPSEVSYG-------VLLDGLCKNAE---FDLARGFYMRMKRNG--VCVGRITYTGMID-- 451

  Fly   365 RPVEKILSICKSLQSEGLNPKALTIATEAGLTNGVINNALPLLQEMKNAGL-PIRQHYFWPLICS 428
                   .:||                     ||.::.|:.||.||...|: |....|      |
plant   452 -------GLCK---------------------NGFLDEAVVLLNEMSKDGIDPDIVTY------S 482

  Fly   429 AESNQVLEIVRRMQQEFSVFPNSETVRDYVIPNLKEKNWERIVTSLRDAGV-PNSTAVTSAVYSA 492
            |..|...::.|                        .|..:.||..:...|: ||....::.:|:.
plant   483 ALINGFCKVGR------------------------FKTAKEIVCRIYRVGLSPNGIIYSTLIYNC 523

  Fly   493 LVTHQIAEAAKIMEKNRAYYVPFLFKQPLILALSHTNDYASFIRCVRQIHEGLQFRQGKDEEVEQ 557
            .....:.||.:|.|             .:||. .||.|:.:|...|..:     .:.||..|.|
plant   524 CRMGCLKEAIRIYE-------------AMILE-GHTRDHFTFNVLVTSL-----CKAGKVAEAE- 568

  Fly   558 VEGVAAVPTERITPDVVG------------------AIVQEAT------TYFRRDRGATLEKILK 598
             |.:..:.::.|.|:.|.                  ::..|.|      |:|      |...:||
plant   569 -EFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFF------TYGSLLK 626

  Fly   599 GLVKQGLSISSDKATQLSEQLGSELTPKISELLGKLSSGELEPVPLPNSGKRSLDSLSINELERF 663
            ||.|.|....::|..:                       .|..||      .::|::..|
plant   627 GLCKGGHLREAEKFLK-----------------------SLHAVP------AAVDTVMYN----- 657

  Fly   664 IVNVEGKGENANNIKRQLLNACFRSQNLEKTLQVIEKLEAEKFQIPVGIYAQLIDLNTHHKKSSE 728
                            .||.|..:|.||.|
plant   658 ----------------TLLTAMCKSGNLAK----------------------------------- 671

  Fly   729 ALEIYGKLKAKDATFQLDNLKAVRLADLLLQEERVDAAFKILEENKKEVPVAEAEGSY---NYMS 790
            |:.::|::..:  :...|:.....|...|.::.:...|....:|       |||.|:.   ..|.
plant   672 AVSLFGEMVQR--SILPDSYTYTSLISGLCRKGKTVIAILFAKE-------AEARGNVLPNKVMY 727

  Fly   791 TVWRILNSLAEAGQPER---LRKLFDVLVGANYIVPTNVLLGPLIKVHLVKDDIPKAIEAFEEIC 852
            |.:  ::.:.:|||.:.   .|:..|.|.....||.||.:                 |:.:..:.
plant   728 TCF--VDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAM-----------------IDGYSRMG 773

  Fly   853 QKYKSTPWKNELACRLIQKEDAANL----------QKLTDLST-----------GIHGEVNSLYD 896
            :..|:    |:|...:..:....||          .|..|:||           ||..:..:.:.
plant   774 KIEKT----NDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHS 834

  Fly   897 LVFSFVECGRVRQARKILET---PGLRTRPQRINSACDRYKNEGLLQP--LEGLIEATKDLGHID 956
            ||....|...:....|||:.   .|:..         |||....|:..  ..|.|....||
plant   835 LVLGICESNMLEIGLKILKAFICRGVEV---------DRYTFNMLISKCCANGEINWAFDL---- 886

  Fly   957 RNKIYYTLLLSYDKADEAEKALGLWTK-------------MQEENVTPND--------------- 993
             .|:..:|.:|.|| |..:..:.:..:             |.::.::|..
plant   887 -VKVMTSLGISLDK-DTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGD 949

  Fly   994 ---AFLLKLAEILSKKNIDVPFVVPETQNEQAKAKKSKAKDAT 1033
               ||::| .|:::.|  ..|..|.|:...:|.||..||.:||
plant   950 IKTAFVVK-EEMIAHK--ICPPNVAESAMVRALAKCGKADEAT 989

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
bsf	NP_523596.2	PPR_2	139..187	CDD:289786	15/48 (31%)
		PPR repeat	142..169	CDD:276811	8/27 (30%)
		PPR_1	169..202	CDD:289614	10/32 (31%)
		PPR_2	173..222	CDD:289786	15/48 (31%)
		PPR repeat	177..204	CDD:276811	8/26 (31%)
		PPR repeat	210..239	CDD:276811	9/30 (30%)
		PPR_2	213..257	CDD:289786	15/45 (33%)
		PPR repeat	245..274	CDD:276811	8/28 (29%)
		Pterin_binding	<456..>543	CDD:294150	18/87 (21%)
		PPR repeat	681..704	CDD:276811	7/22 (32%)
		PPR repeat	710..739	CDD:276811	2/28 (7%)
		PPR repeat	780..818	CDD:276811	12/43 (28%)
		PPR repeat	825..854	CDD:276811	2/28 (7%)
AT5G55840	NP_001331238.1	None

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	109	1.000	Inparanoid score	I2075
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X345
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	3.050