DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsf and AT5G28460

DIOPT Version :10

Sequence 1:NP_523596.2 Gene:bsf / 35100 FlyBaseID:FBgn0284256 Length:1412 Species:Drosophila melanogaster
Sequence 2:NP_680234.1 Gene:AT5G28460 / 832933 AraportID:AT5G28460 Length:766 Species:Arabidopsis thaliana


Alignment Length:976 Identity:178/976 - (18%)
Similarity:332/976 - (34%) Gaps:335/976 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 PEELPEVRTALVQEIWKTLNALNVPMDISHYNALLRVYLENEHGFAPTDFLAEIEAKGIEPNRVT 177
            ||...|.:..:|.:..|||.  |.|                :|.:|.::.|:.:.......:.:.
plant    34 PEIKSESQEFVVVKFVKTLQ--NTP----------------QHDWASSESLSALVVSSSSASPLV 80

  Fly   178 YQRLIARYCQQGDIEGATRILEFMRAKSLPVNENVFNSLILGHSQANDLESAKGILGVMMQAGLE 242
            :.::..|.   |....|....|::.|||..:.... .||.|.      |:|      |:..||.|
plant    81 FSQITRRL---GSYSLAISFFEYLDAKSQSLKRRE-ESLSLA------LQS------VIEFAGSE 129

  Fly   243 PSADTYTTLLCAFARHGDLAAVKETLAECEQKEIILLDKDLLDIVYTLTVNGNGEHVDDVLTKLR 307
            |  |....||    |..::|         ::|.|            .||:         |.||| 
plant   130 P--DPRDKLL----RLYEIA---------KEKNI------------PLTI---------VATKL- 157

  Fly   308 LSPGFNQDAVNVILRLVNKGHEDVGLKLLRVMPRSSRVNGEPVDVGAFFIRQMVKANRPVEKILS 372
                                       |:|...|...||                     :.:| 
plant   158 ---------------------------LIRWFGRMGMVN---------------------QSVL- 173

  Fly   373 ICKSLQSEGLNPKALTIATEAGLTNGVINNALPLLQEMKNAGLPIRQHYFWPLICSAESNQVLEI 437
            :.:.|.|...|.:...:..:..|.||::::|..:|.||                           
plant   174 VYERLDSNMKNSQVRNVVVDVLLRNGLVDDAFKVLDEM--------------------------- 211

  Fly   438 VRRMQQEFSVFPNSETVRDYVIPN------LKEKNWERIVTSLRDAGV-PNSTAVTSAVYSALVT 495
               :|:| ||||.:....|.|:..      |.|:....:::.....|| |||..:|..:.|....
plant   212 ---LQKE-SVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKN 272

  Fly   496 HQIAEAAKIME---KNRAYYVPFLFKQPLILALSHTNDYASFIRCVRQIHEGLQFRQGKDEEVEQ 557
            .:...|..|:.   ||         |.||     ....:.:.:.|:           |::.::.:
plant   273 ARANTAWDILSDLMKN---------KTPL-----EAPPFNALLSCL-----------GRNMDISR 312

  Fly   558 VEGVAAVPTE-RITPDVV--GAI---------VQEATTYFRRDRGATLE-------------KIL 597
            :..:.....| :|.||||  |.:         |.||...|.:.||...:             .::
plant   313 MNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLI 377

  Fly   598 KGLVKQGLSISSDK---ATQLSE-----------------QLGSELTPKISELLGKLSSGELEPV 642
            .||.|.|....:::   ..:|.|                 :.|...|.|  |::.::...|::|.
plant   378 DGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAK--EVVSRMKEDEIKPN 440

  Fly   643 PLPNSGKRSLDSL--------SINELERFIVNVEGKGENANNIK-RQLLNACFRSQNLEKTLQVI 698
            .:      :::::        .:|....|.:::|.:|...|.:. ..|::||....|:||.:...
plant   441 VV------TVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWY 499

  Fly   699 EKLEAEKFQIPVGIYAQLIDLNTHHKKSSEALEIYGKLKAKDATFQLDNLKAVRLADLLLQEERV 763
            ||:..........||..||......::..:|:.:..||  |:..|.||.|....|..|...:...
plant   500 EKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKL--KEGGFSLDLLAYNMLIGLFCDKNNA 562

  Fly   764 DAAFKILEENKKEVPVAEA---------EGSYNYMSTVWRILNSLAEAGQPERLRKLFDVLVGAN 819
            :..:::|.:.:||....::         .|.:....:|.|::..:.|.|                
plant   563 EKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDG---------------- 611

  Fly   820 YIVPTNVLLGPLIKVHLVKDDIPKAIEAFEEICQKYKSTPWKNELACRLIQKEDAANLQKLTDLS 884
             :.||....|.:|..:....::.:|::.|:::                                 
plant   612 -LDPTVTTYGAVIDAYCSVGELDEALKLFKDM--------------------------------- 642

  Fly   885 TGIHGEVNS---LYD-LVFSFVECGRVRQARKILE-------TPGLRTRPQRINSACDRYKNEGL 938
             |:|.:||.   :|: |:.:|.:.|...||..:.|       .|.:.|.........::.:.|.|
plant   643 -GLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETL 706

  Fly   939 LQPLEGLIEATKDLGHIDRNKIYYTLLLSYDKADEAEKALGLWTKMQ-------EENVTPNDAFL 996
            |:.::.::|.:     .:.|:|...:|:  ::...:::.:.|...||       .|..:|.|.|.
plant   707 LKLMDEMVEQS-----CEPNQITMEILM--ERLSGSDELVKLRKFMQGYSVASPTEKASPFDVFS 764

  Fly   997 L 997
            |
plant   765 L 765

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bsfNP_523596.2 PPR repeat 142..169 CDD:276811 3/26 (12%)
PLN03218 <163..>261 CDD:215636 22/97 (23%)
PPR repeat 177..204 CDD:276811 4/26 (15%)
PPR repeat 210..239 CDD:276811 6/28 (21%)
PPR_2 213..257 CDD:463778 13/43 (30%)
PPR repeat 245..274 CDD:276811 5/28 (18%)
Pterin_binding <456..>543 CDD:444759 19/96 (20%)
LapB <661..855 CDD:442196 40/203 (20%)
PPR repeat 681..704 CDD:276811 8/22 (36%)
PPR repeat 710..739 CDD:276811 7/28 (25%)
PPR repeat 780..818 CDD:276811 5/46 (11%)
PPR repeat 825..854 CDD:276811 4/28 (14%)
AT5G28460NP_680234.1 PPR repeat 152..185 CDD:276811 12/91 (13%)
PPR repeat 189..214 CDD:276811 7/54 (13%)
PPR repeat 266..288 CDD:276811 3/21 (14%)
PLN03218 <270..>687 CDD:215636 87/502 (17%)
PPR repeat 297..323 CDD:276811 2/36 (6%)
PPR repeat 331..358 CDD:276811 6/26 (23%)
PPR repeat 370..400 CDD:276811 5/29 (17%)
PPR repeat 406..435 CDD:276811 4/30 (13%)
PPR repeat 441..470 CDD:276811 3/34 (9%)
PPR repeat 476..504 CDD:276811 8/27 (30%)
PPR repeat 511..540 CDD:276811 8/30 (27%)
PPR repeat 548..575 CDD:276811 3/26 (12%)
PPR repeat 583..610 CDD:276811 3/26 (12%)
PPR repeat 616..646 CDD:276811 5/63 (8%)
PPR repeat 652..681 CDD:276811 7/28 (25%)
PPR_2 685..729 CDD:463778 8/48 (17%)
PPR repeat 687..715 CDD:276811 4/27 (15%)
PPR repeat 722..746 CDD:276811 3/25 (12%)

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