DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bsf and AT5G08310

DIOPT Version :10

Sequence 1:NP_523596.2 Gene:bsf / 35100 FlyBaseID:FBgn0284256 Length:1412 Species:Drosophila melanogaster
Sequence 2:NP_196448.2 Gene:AT5G08310 / 830727 AraportID:AT5G08310 Length:832 Species:Arabidopsis thaliana


Alignment Length:862 Identity:170/862 - (19%)
Similarity:289/862 - (33%) Gaps:269/862 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 LVNSVRENETSNLL----NNAPCMCGQFQNGFATNAAAKAELSLDKQIRRLDQDVRRIG-----R 77
            :::..|:|.:...|    .|:.|.......||.......|.| :|:.....|: ||.:|     .
plant   115 ILSRARQNASLKALVVDVLNSRCFMSPGAFGFFIRCLGNAGL-VDEASSVFDR-VREMGLCVPNA 177

  Fly    78 ISRRDLEEVLDEIRSHRTATSSQSLLVIRCCG------NLVPEELPEVRTALVQEIW----KTLN 132
            .:...|.|.:.:..|.........|..:|.||      .|.|          |.:::    |:..
plant   178 YTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTP----------VLQVYCNTGKSER 232

  Fly   133 ALNVPMDI-------SHYNALLRV----YLENEHGFAPTDFLAEIEAKGIEPNRVTYQRLIARYC 186
            ||:|..:|       .|.:.:|.|    :.:.:..|   :.:..:|.:.|..|..||..||..:.
plant   233 ALSVFNEILSRGWLDEHISTILVVSFCKWGQVDKAF---ELIEMLEERDIRLNYKTYCVLIHGFV 294

  Fly   187 QQGDIEGATRILEFMRAKSLPVNENVFNSLILGHSQANDLESAKGILGVMMQAGLEPSADTYTTL 251
            ::..|:.|.::.|.||...:..:..:::.||.|..:..|||.|..:...:.::|:.|.......|
plant   295 KESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKL 359

  Fly   252 LCAFARHGDLAAVKET-LAECEQKEIILLDK---------DLLDIVYTLTVNGNGEHVDDVLTKL 306
            ||:|:...:|:.:.|. :.:.::|.::||.|         ||:...|:...|             
plant   360 LCSFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQN------------- 411

  Fly   307 RLSPGFNQDAVNVILRLVNKGHEDVGLKLLRVMPRSSRVNGEPVDVGAFFIRQMVKANRPVEKIL 371
             |...:..|.|:.|::|: |.|...      ::|.|        |..:..|..:||||: |:..:
plant   412 -LMGNYESDGVSEIVKLL-KDHNKA------ILPDS--------DSLSIVINCLVKANK-VDMAV 459

  Fly   372 SICKSLQSEGL--NPKALTIATEAGLTNGVINNALPLLQEMKNAGLPIRQHYFWPLI-CSAESNQ 433
            ::...:...||  .|.......|.....|....:|.||.|||:||:...|.....:. |.||...
plant   460 TLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCD 524

  Fly   434 ---VLEIVRRMQQEFSVFPNSETVRDYVIPNLKEKNWERIVTSLRDAGVPNSTAVTSAVY----- 490
               .|:::::|:  |..|                :.|.:..|.|......|..||.:..|     
plant   525 FVGALDLLKKMR--FYGF----------------EPWIKHTTFLVKKLCENGRAVDACKYLDDVA 571

  Fly   491 -SALVTHQIAEAAKIMEKNRAYYVPFLFKQPLILALSHTNDYASFIRCVRQIHEGLQFRQGKDEE 554
             ...:.|.:|..|.|                                      :||...:|.|..
plant   572 GEGFLGHMVASTAAI--------------------------------------DGLIKNEGVDRG 598

  Fly   555 VEQVEGVAAVPTERITPDVVGAIVQEATTYFRRDRGATLEKILKGLVKQGLSISSDKATQLSEQL 619
            :|....:.|   ....|||:...|                 ::|.|.|...::.:|  ...:|.:
plant   599 LELFRDICA---NGHCPDVIAYHV-----------------LIKALCKACRTMEAD--ILFNEMV 641

  Fly   620 GSELTPKI----SELLGKLSSGELEPVPLPNSGKRSLDSLSINELERFIVNVEGKGENANNIKRQ 680
            ...|.|.:    |.:.|....||::                             :|         
plant   642 SKGLKPTVATYNSMIDGWCKEGEID-----------------------------RG--------- 668

  Fly   681 LLNACFRSQNLEKTLQVIEKLEAEKFQIPVGIYAQLIDLNTHHKKSSEALEIYGKLKAKDA---- 741
             |:...|....||...||             .|..||.......:.|||:..:.::|.||.    
plant   669 -LSCIVRMYEDEKNPDVI-------------TYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNR 719

  Fly   742 -TF----------------------------QLDNLKAVRLADLLLQEERVDAAFKILEE--NKK 775
             ||                            :.|:...:.|....|..|.::|.|.|..|  :|.
plant   720 ITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKG 784

  Fly   776 EVPVAEAEGSYNYMSTV 792
            ..||:.   ..|||..|
plant   785 RFPVSV---DRNYMLAV 798

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bsfNP_523596.2 PPR repeat 142..169 CDD:276811 5/30 (17%)
PLN03218 <163..>261 CDD:215636 25/97 (26%)
PPR repeat 177..204 CDD:276811 9/26 (35%)
PPR repeat 210..239 CDD:276811 7/28 (25%)
PPR_2 213..257 CDD:463778 13/43 (30%)
PPR repeat 245..274 CDD:276811 6/29 (21%)
Pterin_binding <456..>543 CDD:444759 11/92 (12%)
LapB <661..855 CDD:442196 33/167 (20%)
PPR repeat 681..704 CDD:276811 6/22 (27%)
PPR repeat 710..739 CDD:276811 7/28 (25%)
PPR repeat 780..818 CDD:276811 4/13 (31%)
PPR repeat 825..854 CDD:276811
AT5G08310NP_196448.2 PPR repeat 108..135 CDD:276811 3/19 (16%)
PPR repeat 141..170 CDD:276811 8/30 (27%)
PPR_2 148..189 CDD:463778 9/42 (21%)
PPR repeat 179..208 CDD:276811 5/28 (18%)
PLN03218 <210..>609 CDD:215636 101/500 (20%)
PPR repeat 216..243 CDD:276811 8/36 (22%)
PPR repeat 252..277 CDD:276811 4/27 (15%)
PPR repeat 283..312 CDD:276811 9/28 (32%)
PPR repeat 318..347 CDD:276811 7/28 (25%)
PPR repeat 389..415 CDD:276811 6/39 (15%)
PPR repeat 441..468 CDD:276811 6/27 (22%)
PPR repeat 474..503 CDD:276811 9/28 (32%)
PPR repeat 509..536 CDD:276811 5/26 (19%)
PPR repeat 544..569 CDD:276811 6/24 (25%)
PPR repeat 586..608 CDD:276811 7/62 (11%)
PPR_2 612..661 CDD:463778 13/67 (19%)
PPR repeat 616..643 CDD:276811 6/45 (13%)
PPR 651..684 CDD:273253 9/71 (13%)
PPR repeat 651..678 CDD:276811 7/65 (11%)
PPR_2 682..731 CDD:463778 13/61 (21%)
PPR repeat 684..713 CDD:276811 9/41 (22%)
PPR_2 717..757 CDD:463778 3/39 (8%)
PPR repeat 719..748 CDD:276811 2/28 (7%)
PPR repeat 754..783 CDD:276811 7/28 (25%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.