DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsf and AT4G19440

DIOPT Version :9

Sequence 1:NP_523596.2 Gene:bsf / 35100 FlyBaseID:FBgn0284256 Length:1412 Species:Drosophila melanogaster
Sequence 2:NP_001190771.2 Gene:AT4G19440 / 827685 AraportID:AT4G19440 Length:838 Species:Arabidopsis thaliana


Alignment Length:306 Identity:76/306 - (24%)
Similarity:127/306 - (41%) Gaps:35/306 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 VRENETSNLLNNAPCMCGQFQNGFATNAAAKAELSLDKQIRRLDQDVRRIGRISRRDLEEV---L 87
            |.:..|||.|.:..|..|:....|...   |..|.....:.|:..:....|...::.|:|.   |
plant   515 VVDTRTSNALLHGLCEAGKLDEAFRIQ---KEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFL 576

  Fly    88 DEI--RSHRTATSSQSLLVIRCCG----NLVPEELPEVRTALVQEIWKTLNALNVPMDISHYNAL 146
            ||:  |..:....:.|:|:   ||    |.|.|.:         :.|.......:..|:..|:.:
plant   577 DEMVKRGLKPDNYTYSILI---CGLFNMNKVEEAI---------QFWDDCKRNGMLPDVYTYSVM 629

  Fly   147 LRVYLENEHGFAPTDFLAEIEAKGIEPNRVTYQRLIARYCQQGDIEGATRILEFMRAKSLPVNEN 211
            :....:.|......:|..|:.:|.::||.|.|..||..||:.|.:..|..:.|.|:.|.:..|..
plant   630 IDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSA 694

  Fly   212 VFNSLILGHSQANDLESAKGILGVMMQAGLEPSADTYTTLLCAFARHGDLAAVKETLAECEQKEI 276
            .:.|||.|.|..:.:|.||.:...|...||||:...||.|:..:.:.|.:..|:..|.|...|.:
plant   695 TYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNV 759

  Fly   277 ILLDKDLLDIVYTLTV-----NGNGEHVDDVLTKLRLSPGFNQDAV 317
                 ....|.||:.:     :||......:|.::| ..|...|::
plant   760 -----HPNKITYTVMIGGYARDGNVTEASRLLNEMR-EKGIVPDSI 799

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bsfNP_523596.2 PPR_2 139..187 CDD:289786 13/47 (28%)
PPR repeat 142..169 CDD:276811 4/26 (15%)
PPR_1 169..202 CDD:289614 12/32 (38%)
PPR_2 173..222 CDD:289786 18/48 (38%)
PPR repeat 177..204 CDD:276811 9/26 (35%)
PPR repeat 210..239 CDD:276811 9/28 (32%)
PPR_2 213..257 CDD:289786 16/43 (37%)
PPR repeat 245..274 CDD:276811 7/28 (25%)
Pterin_binding <456..>543 CDD:294150
PPR repeat 681..704 CDD:276811
PPR repeat 710..739 CDD:276811
PPR repeat 780..818 CDD:276811
PPR repeat 825..854 CDD:276811
AT4G19440NP_001190771.2 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 109 1.000 Inparanoid score I2075
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.960

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