DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsf and AT3G54980

DIOPT Version :9

Sequence 1:NP_523596.2 Gene:bsf / 35100 FlyBaseID:FBgn0284256 Length:1412 Species:Drosophila melanogaster
Sequence 2:NP_001325869.1 Gene:AT3G54980 / 824663 AraportID:AT3G54980 Length:851 Species:Arabidopsis thaliana


Alignment Length:893 Identity:177/893 - (19%)
Similarity:320/893 - (35%) Gaps:247/893 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LLRYFAGFTRN------VLVNSVRENETSNLLNNAPCMCGQFQNGFATNAAA-KAELSLDKQIRR 67
            |:||.:  |.|      |||        |.|:::|...      ||..|:.| ...|:...:.|:
plant   130 LIRYVS--TSNPTPMASVLV--------SKLVDSAKSF------GFEVNSRAFNYLLNAYSKDRQ 178

  Fly    68 LDQDVRRIGRISRRDLEEVLDEIRSHRTATSSQSLLVIRCCGNLVPEELPEVRTALVQEIWKTLN 132
            .|..|..:.::    ||  ||.|........:.|.||.|   |.:.|         .:|::..:.
plant   179 TDHAVDIVNQM----LE--LDVIPFFPYVNRTLSALVQR---NSLTE---------AKELYSRMV 225

  Fly   133 ALNVPMDISHYNALLRVYLENEHGFAPTDFLAEIEAKGIEPNRVTYQRLIARYCQQGDIEGATRI 197
            |:.|..|......|:|..|..|......:.|:....:|.||:.:.|...:...|:..|:..|..:
plant   226 AIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSL 290

  Fly   198 LEFMRAKSLPV-NENVFNSLILGHSQANDLESAKGILGVMMQAGLEPSADTYTTLLCAFARHGDL 261
            |..|:.|.|.| ::..:.|:||...:..:::.|..:...|:..|:..:....|:|:....::.||
plant   291 LREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDL 355

  Fly   262 AAVKETLAECEQKEIILLDKDLLDIVYTLTVNGNGEHVDDVLTKLRLSPGFNQDAVNVILRLVNK 326
            .:.           ::|.||                     :.|...||  |....:|::....|
plant   356 VSA-----------LVLFDK---------------------MEKEGPSP--NSVTFSVLIEWFRK 386

  Fly   327 GHEDVGLKLLRVMPRSSRVNGEPVDVGAFFIRQMVKANRPVEKILSICKSLQSEGLNPKALTIAT 391
                               |||                  :||.|...|.::..||.|....:.|
plant   387 -------------------NGE------------------MEKALEFYKKMEVLGLTPSVFHVHT 414

  Fly   392 --EAGLTNGVINNALPLLQEMKNAGLPIRQHYF-------WPLIC-SAESNQVLEIVRRMQQEFS 446
              :..|.......||.|..|....||   .:.|       |  :| ..::::..|::.:|:.. .
plant   415 IIQGWLKGQKHEEALKLFDESFETGL---ANVFVCNTILSW--LCKQGKTDEATELLSKMESR-G 473

  Fly   447 VFPNSETVRDYVIPNLKEKNWE--RIV-TSLRDAGV-PNSTAVTSAVYSALVTHQIAEAAKI--- 504
            :.||..:..:.::.:.::||.:  ||| :::.:.|: ||:...:..:......|....|.::   
plant   474 IGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNH 538

  Fly   505 -----MEKNRAYYVPFLFKQPLILALSHTND-------YASFIR----CV-----RQIHEGLQFR 548
                 :|.|...|      |.:|..|.....       .|:.|.    ||     ..|.:|. |:
plant   539 MTSSNIEVNGVVY------QTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGF-FK 596

  Fly   549 QGK-DEEVEQVEGVAAVPTERITPDVVGAIVQEATTYFRRDRGATLEKILKGLVKQGLSISSDKA 612
            :|: |..|...|.:..   ..|:|:|:                 |...::.||.|..   ..|:|
plant   597 EGEMDSAVAAYEEMCG---NGISPNVI-----------------TYTSLMNGLCKNN---RMDQA 638

  Fly   613 TQLSEQLGSELTPKISELLGKLSSGELEPVPLPNSGKRSLDSLSINELERFIVNVEGKGENANN- 676
            .::.:::.::.........|.|..|..:     .|...|..:|....||        :|.|.:. 
plant   639 LEMRDEMKNKGVKLDIPAYGALIDGFCK-----RSNMESASALFSELLE--------EGLNPSQP 690

  Fly   677 IKRQLLNACFRSQNLEKTLQVIEKLEAEKFQIPVGIYAQLIDLNTHHKKSSEALEIYGKLKAKDA 741
            |...|::......|:...|.:.:|:..:..:..:|.|..|||               |.||.   
plant   691 IYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLID---------------GLLKD--- 737

  Fly   742 TFQLDNLKAVRLADLLLQEERVDAAFKILEENKKEVPVAEAEGSYNYMSTVWRILNSLAEAGQPE 806
                        .:|:|..|        |....:.|.:...|..|    ||  |:|.|::.||..
plant   738 ------------GNLILASE--------LYTEMQAVGLVPDEIIY----TV--IVNGLSKKGQFV 776

  Fly   807 RLRKLFDVLVGANYIVPTNVLLGPLIKVHLVKDDIPKAIEAFEEICQK 854
            ::.|:|:.: ..|.:.|..::...:|..|..:.::.:|....:|:..|
plant   777 KVVKMFEEM-KKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDK 823

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bsfNP_523596.2 PPR_2 139..187 CDD:289786 10/47 (21%)
PPR repeat 142..169 CDD:276811 5/26 (19%)
PPR_1 169..202 CDD:289614 8/32 (25%)
PPR_2 173..222 CDD:289786 13/49 (27%)
PPR repeat 177..204 CDD:276811 6/26 (23%)
PPR repeat 210..239 CDD:276811 5/28 (18%)
PPR_2 213..257 CDD:289786 8/43 (19%)
PPR repeat 245..274 CDD:276811 4/28 (14%)
Pterin_binding <456..>543 CDD:294150 21/114 (18%)
PPR repeat 681..704 CDD:276811 4/22 (18%)
PPR repeat 710..739 CDD:276811 8/28 (29%)
PPR repeat 780..818 CDD:276811 11/37 (30%)
PPR repeat 825..854 CDD:276811 4/28 (14%)
AT3G54980NP_001325869.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 109 1.000 Inparanoid score I2075
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.960

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