DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsf and AT2G16880

DIOPT Version :10

Sequence 1:NP_523596.2 Gene:bsf / 35100 FlyBaseID:FBgn0284256 Length:1412 Species:Drosophila melanogaster
Sequence 2:NP_179280.1 Gene:AT2G16880 / 816189 AraportID:AT2G16880 Length:743 Species:Arabidopsis thaliana


Alignment Length:817 Identity:155/817 - (18%)
Similarity:280/817 - (34%) Gaps:288/817 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 LEEVLDEIRSHRTATSSQSLLV---------IRCCGNLVPEELPEVRTALVQEIWKTLNALNVPM 138
            |..|:..:.||.....::||||         :..|.:|:...|                .|:.|.
plant    81 LISVVRSLLSHHKFADAKSLLVSYIRTSDASLSLCNSLLHPNL----------------HLSPPP 129

  Fly   139 DISHYNALLRVYL-ENEHGFAPTDFLAEIEAKGIEPNRVTYQRL---IARYCQQGDIEGATRILE 199
            ..:.::..|..|| |.:...|...|...|..| ::||.:|...|   :.||.....|..|..:.:
plant   130 SKALFDIALSAYLHEGKPHVALQIFQKMIRLK-LKPNLLTCNTLLIGLVRYPSSFSISSAREVFD 193

  Fly   200 FMRAKSLPVNENVFNSLILGHSQANDLESAKGILGVMM-QAGLEPSADTYTTLLCAFARHGDLAA 263
            .|....:.:|...||.|:.|:.....||.|.|:|..|: :..:.|...||.|:|.|.::.|.|:.
plant   194 DMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSD 258

  Fly   264 VKETLAECEQKEIILLDKDLLDIVYTLTVNGN---GEHVDDVLTKLRLSPGFNQDAVNVILR-LV 324
            :||.|.:.::..::.......::||.....|:   ...:.:::.:..:.|  :....|:::. |.
plant   259 LKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP--DLCTYNILINGLC 321

  Fly   325 NKGHEDVGLKLLRVMPRSSRVNGEPVDVGAFFIRQMVKANRPVEKILSICKSLQSEGLNPKALTI 389
            |.|....||:|:..|                                   |||:   |.|..:|.
plant   322 NAGSMREGLELMDAM-----------------------------------KSLK---LQPDVVTY 348

  Fly   390 AT------EAGLTNGVINNALPLLQEMKNAGLPIRQHYFWPLICSAESNQVLEIVRRMQQEFSVF 448
            .|      |.||:    ..|..|:::|:|.|:              ::||               
plant   349 NTLIDGCFELGLS----LEARKLMEQMENDGV--------------KANQ--------------- 380

  Fly   449 PNSETVRDYVIPNLKEKNWERIVTSLRDAGVPNSTAVTSAVYSALVTHQIAEAAKIMEKNRAYYV 513
                                                         |||.|:             :
plant   381 ---------------------------------------------VTHNIS-------------L 387

  Fly   514 PFLFKQPLILALSHTNDYASFIRCVRQIHEGLQFRQGKDEEVEQVEGVAAVPTERITPDVVGAIV 578
            .:|.|:                          :.|:....:|:::     |.....:||:|    
plant   388 KWLCKE--------------------------EKREAVTRKVKEL-----VDMHGFSPDIV---- 417

  Fly   579 QEATTYFRRDRGATLEKILKGLVKQGLSISSDKATQLSEQLGSE----LTPKISELLGKLSSGEL 639
                         |...::|..:|.| .:|.  |.::..::|.:    .|..::.:|..|..   
plant   418 -------------TYHTLIKAYLKVG-DLSG--ALEMMREMGQKGIKMNTITLNTILDALCK--- 463

  Fly   640 EPVPLPNSGKRSLDSLS--INELER--FIVNVEGKGENANNIKRQLLNACFRSQNLEKTLQVIEK 700
                     :|.||...  :|...:  |||:....|        .|:...||.:.:||.|::.::
plant   464 ---------ERKLDEAHNLLNSAHKRGFIVDEVTYG--------TLIMGFFREEKVEKALEMWDE 511

  Fly   701 LEAEKFQIPVGIYAQLIDLNTHHKKSSEALEIYGKLKAK-----DATFQLDNLKAVRLADLLL-- 758
            ::..|....|..:..||....||.|:..|:|.:.:|...     |:||.          .::|  
plant   512 MKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFN----------SIILGY 566

  Fly   759 -QEERVDAAFKILEENKKEVPVAEAEGSY---NYMSTVWRILNSLAEAGQPERLRKLFDVLVGAN 819
             :|.||:.||:...|:.|.        |:   ||...:  :||.|.:.|..|:....|:.|:...
plant   567 CKEGRVEKAFEFYNESIKH--------SFKPDNYTCNI--LLNGLCKEGMTEKALNFFNTLIEER 621

  Fly   820 YI--VPTNVLLGPLIKVHLVKDDIPKAIEAFEEICQK 854
            .:  |..|.::....|...:|:    |.:...|:.:|
plant   622 EVDTVTYNTMISAFCKDKKLKE----AYDLLSEMEEK 654

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bsfNP_523596.2 PPR repeat 142..169 CDD:276811 7/27 (26%)
PLN03218 <163..>261 CDD:215636 29/101 (29%)
PPR repeat 177..204 CDD:276811 7/29 (24%)
PPR repeat 210..239 CDD:276811 10/29 (34%)
PPR_2 213..257 CDD:463778 16/44 (36%)
PPR repeat 245..274 CDD:276811 10/28 (36%)
Pterin_binding <456..>543 CDD:444759 6/86 (7%)
LapB <661..855 CDD:442196 48/209 (23%)
PPR repeat 681..704 CDD:276811 6/22 (27%)
PPR repeat 710..739 CDD:276811 9/28 (32%)
PPR repeat 780..818 CDD:276811 10/40 (25%)
PPR repeat 825..854 CDD:276811 5/28 (18%)
AT2G16880NP_179280.1 PPR_2 138..178 CDD:463778 12/40 (30%)
PPR repeat 138..160 CDD:276811 7/21 (33%)
PPR_2 164..215 CDD:463778 14/50 (28%)
PPR repeat 168..198 CDD:276811 7/29 (24%)
PLN03218 <205..>611 CDD:215636 115/627 (18%)
PPR repeat 206..233 CDD:276811 10/26 (38%)
PPR repeat 242..269 CDD:276811 10/26 (38%)
PPR repeat 277..304 CDD:276811 3/26 (12%)
PPR repeat 310..339 CDD:276811 9/63 (14%)
PPR repeat 345..374 CDD:276811 8/32 (25%)
PPR repeat 418..445 CDD:276811 7/29 (24%)
PPR repeat 451..480 CDD:276811 7/40 (18%)
PPR repeat 488..515 CDD:276811 7/34 (21%)
PPR repeat 521..550 CDD:276811 9/28 (32%)
PPR repeat 556..581 CDD:276811 9/34 (26%)
PPR repeat 591..620 CDD:276811 9/30 (30%)
PPR_2 624..668 CDD:463778 7/35 (20%)
PPR repeat 625..654 CDD:276811 6/32 (19%)
PPR repeat 660..685 CDD:276811
Blue background indicates that the domain is not in the aligned region.

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