DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment bsf and EMB2794

DIOPT Version :9

Sequence 1:	NP_523596.2	Gene:	bsf / 35100	FlyBaseID:	FBgn0284256	Length:	1412	Species:	Drosophila melanogaster
Sequence 2:	NP_001318179.1	Gene:	EMB2794 / 814746	AraportID:	AT2G02150	Length:	761	Species:	Arabidopsis thaliana

Alignment Length:	619	Identity:	133/619 - (21%)
Similarity:	221/619 - (35%)	Gaps:	183/619 - (29%)

- Green bases have known domain annotations that are detailed below.

  Fly     2 ASILRTGKLLRYF-----AG-----FTRNVLVNSVRENETSNLLNNAPCMCGQFQNGFATNAAAK 56
            |.:.:|..:.|:|     ||     ||.|::::               |||.:      .:..|.
plant   238 AKLGKTDDVKRFFKDMIGAGARPTVFTYNIMID---------------CMCKE------GDVEAA 281

  Fly    57 AELSLDKQIRRLDQD-------VRRIGRISRRD-----LEEVLDEIRSHRTATSSQSLLVIRCCG 109
            ..|..:.:.|.|..|       :...|::.|.|     .||:.|                 .||.
plant   282 RGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKD-----------------MCCE 329

  Fly   110 NLVPEELPEVRTALVQEIWKTLNALNVPMDISHYNALLRVYLENEHGFAP--TDFLAEIEAKGIE 172
                   |:|.|                     ||||:..:.  :.|..|  .:|..|::..|::
plant   330 -------PDVIT---------------------YNALINCFC--KFGKLPIGLEFYREMKGNGLK 364

  Fly   173 PNRVTYQRLIARYCQQGDIEGATRILEFMRAKSLPVNENVFNSLILGHSQANDLESAKGILGVMM 237
            ||.|:|..|:..:|::|.::.|.:....||...|..||..:.|||..:.:..:|..|..:...|:
plant   365 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 429

  Fly   238 QAGLEPSADTYTTLLCAFARHGDLAAVKETLAECEQKEIILLDK-DLLDIV-----YTLTVNG-- 294
            |.|:|.:..|||.|:       |.....|.:.|.|:    |..| |...::     |...::|
plant   430 QVGVEWNVVTYTALI-------DGLCDAERMKEAEE----LFGKMDTAGVIPNLASYNALIHGFV 483

  Fly   295 ---NGEHVDDVLTKLRLSPGFNQDAVNVILRLVNKGHEDVGLKLLRVMPRSSRVNGEPVDVGAFF 356
               |.:...::|.:|: ..|...|       |:..|....||..|..:..:..|..|..:.|
plant   484 KAKNMDRALELLNELK-GRGIKPD-------LLLYGTFIWGLCSLEKIEAAKVVMNEMKECG--- 537

  Fly   357 IRQMVKANRPVEKILSICKSLQSEGLNPKALTIATEAGLTNGVINNALPLLQEMKNAGLPIRQHY 421
                :|||..:                   .|...:|...:|.....|.||.|||...:.:....
plant   538 ----IKANSLI-------------------YTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVT 579

  Fly   422 FWPLICSAESNQV----LEIVRRMQQEFSVFPNSETVRDYVIPNLKEKNWERIVTSL-----RDA 477
            |..||.....|::    ::...|:..:|.:..|: .:...:|..|.:.|.....|:|     :..
plant   580 FCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANA-AIFTAMIDGLCKDNQVEAATTLFEQMVQKG 643

  Fly   478 GVPNSTAVTSAVYSALVTHQIAEAAKIMEK--NRAYYVPFLFKQPLILALSHTNDYASFIRCVRQ 540
            .||:.||.||.:........:.||..:.:|  .....:..|....|:..|||.|          |
plant   644 LVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCN----------Q 698

  Fly   541 IHEGLQFRQGKDEEVEQVEGVAAVPTERITPDVV 574
            :.:...|       :|::.|      |.|.||.|
plant   699 LQKARSF-------LEEMIG------EGIHPDEV 719

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
bsf	NP_523596.2	PPR_2	139..187	CDD:289786	14/49 (29%)
		PPR repeat	142..169	CDD:276811	8/28 (29%)
		PPR_1	169..202	CDD:289614	9/32 (28%)
		PPR_2	173..222	CDD:289786	16/48 (33%)
		PPR repeat	177..204	CDD:276811	7/26 (27%)
		PPR repeat	210..239	CDD:276811	7/28 (25%)
		PPR_2	213..257	CDD:289786	13/43 (30%)
		PPR repeat	245..274	CDD:276811	8/28 (29%)
		Pterin_binding	<456..>543	CDD:294150	21/93 (23%)
		PPR repeat	681..704	CDD:276811
		PPR repeat	710..739	CDD:276811
		PPR repeat	780..818	CDD:276811
		PPR repeat	825..854	CDD:276811
EMB2794	NP_001318179.1	None
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	109	1.000	Inparanoid score	I2075
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X345
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	2.050