DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bsf and Lrpprc2

DIOPT Version :10

Sequence 1:NP_523596.2 Gene:bsf / 35100 FlyBaseID:FBgn0284256 Length:1412 Species:Drosophila melanogaster
Sequence 2:XP_321013.5 Gene:Lrpprc2 / 1281076 VectorBaseID:AGAMI1_002736 Length:1062 Species:Anopheles gambiae


Alignment Length:1095 Identity:261/1095 - (23%)
Similarity:461/1095 - (42%) Gaps:163/1095 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 GKLLRYFAGFTRNVLVNSVRENETSNLLNNAPCMCGQFQNGFATNAAAKAELSLDKQ-----IRR 67
            |.|.::...|.| :|..|||..:|      .|....|......::.||||.....:|     :|.
Mosquito    32 GVLQQHTVPFAR-LLSQSVRHCQT------VPSAKQQESTAHQSDRAAKAPSGKQQQKPVDSVRL 89

  Fly    68 LDQDVRRIGRISRRDLEEVLDEIRSHRTATSSQSL-LVIRCCGNLVPEELPEVRTALVQEIWKTL 131
            :| ::|....:.||...|.|:::.:......:.:. .:::|||:|:..|..|.|..:.::.|..|
Mosquito    90 VD-ELRSDAIVYRRVQLEKLNQLLAKPFEIPADAYEFLLQCCGSLLCAETLETRMKVFEQFWFYL 153

  Fly   132 NALNVPMDISHYNALLRVYLENEHGFAPTDFLAEIEAKG--IEPNRVTYQRLIARYCQQGDIEGA 194
            ..   |.. .|:..||:||.|||...  ||..|.:.:.|  :|.:...|:.|:....::|||...
Mosquito   154 GE---PQQ-KHWKVLLQVYRENERTI--TDVPAFLASMGDTVEKDADLYRGLLGVLAEKGDIAEM 212

  Fly   195 TRILEFMRAKSLPVNENVFNSLILGHSQANDLESAKGILGVMMQAGLEPSADTYTTLLCAFARHG 259
            ..:.|.|:.::||:..:|.|.:|.|:.:|.||:..:.:|..|..:.:..:.:||..|:.||...|
Mosquito   213 KLVGEMMKERNLPLTVDVINLMIRGYGRAGDLDGVQMVLETMSASSVSANGETYGELMIAFLEDG 277

  Fly   260 ----DLAAVKETLAECEQKEIILLDKDLLDIVYTLTVNGNGEHVDDVLTKL--------RLSPGF 312
                .|..|:|..::.:::.::.|      :...|......|.|..:|..|        |:.|..
Mosquito   278 MGDRVLKMVREKGSQLQERHVLEL------LALALGAKVQPELVRALLKLLPEELTGDGRIHPVL 336

  Fly   313 NQDAVNVILRLVNKGHEDVGLKLLRVMPRSS-RVNGEPVDVGAFFIRQMVKANRPVEKILSICKS 376
            .    ||:..||..||.|..:.||..:|... |.|......|.|.:.:|::.:.|.:::....:.
Mosquito   337 R----NVLSGLVRAGHLDGMMALLDDLPAPQFRANENTDGYGTFLMVEMLRNDVPFDRLNRFLQR 397

  Fly   377 LQSEGLNPKALTIATEAGLTNGVINNALPLLQEMKNAGLP---IRQHYFWPLICSAESNQ----V 434
            |.....|.:|..:|.|.....|     .|....:..|..|   :|.||||||........    |
Mosquito   398 LVQTERNARAYQVACECAAKAG-----HPYFARLLAALAPLEDLRPHYFWPLFMQRTKTDGEAGV 457

  Fly   435 LEIVRRMQQEFSVFPNSETVRDYVIPNLKEKNWERIVTSLRDA----------GVPNSTAVTSAV 489
            |.:::.| ::..|.|:.||:..||:|        ::..:|:|:          ||..:..:|..:
Mosquito   458 LGVLQTM-RKLKVDPDQETLTQYVLP--------KLALTLKDSRAALKIFEACGVRTAVLMTPFI 513

  Fly   490 YSALVTHQIAEAAKIMEKNRAYYVPF---LFKQPLILALSHTNDYASFIRCVRQIHEGLQFRQGK 551
            ...|..::..|..:|:   |.|....   ....||||..:.....|               .|.|
Mosquito   514 SHLLYQNRFDEVLEIV---RLYPTKLDTETLLWPLILQANVNRSGA---------------HQRK 560

  Fly   552 DEEVEQVEGVAAVPTERITPDVVGAIVQEATTYFR-RDRGATLEKILKGLVKQGLSISSDKATQL 615
            ..||.:..|..:..|..   |:.|.::.|..:..: :...|:|..:|....:..:.||...|..|
Mosquito   561 LAEVIRAIGERSADTRH---DLAGQLLLELISNKKSKHDAASLRALLAEFDRFEIKISRMAAGVL 622

  Fly   616 SEQLG----------SELTPKISELLGKLSSGELEPVPLPNSGKRSLDS-------LSINELERF 663
            ....|          .|.|   ..||.|::..:|..:     .|...|:       :|.:|||..
Mosquito   623 KNHFGRAGKATGANEGEAT---DALLKKVTDDQLTIL-----SKELFDTIGVHPRDMSYDELECH 679

  Fly   664 IVNVEGKGENANNIKRQLLNACFRSQNLEKTLQVIEKLEAEKFQIPVGIYAQLIDLNTHHKKSSE 728
            :|.:|.|..|...:.|:||....|....::.|::.:|.:..|.....|:.|.:::|.|......:
Mosquito   680 LVELEQKKLNTRGVLRRLLQLSVREGRYKRALELKQKCDQAKVDQSSGMLASVVELYTKVGNPEQ 744

  Fly   729 ALEIYGKLKAKDATFQLDNLKAVRLADLLLQEERVDAAFKILEENKK---EVPVAEAEGSYNYMS 790
            |.....:|:.:...|.:|..|.:..|.||::..::|.|.|:|.|...   ::..|: |||.:  .
Mosquito   745 AGRTLEQLRKQFPGFVVDEHKILDYAALLVERGQLDGAKKVLRERAAGGGKLRGAD-EGSTS--K 806

  Fly   791 TVWRILNSLAE-------------AGQPERLRKLFDVLVGANYIVPTNVLLGPLIKVHLVKDDIP 842
            .||.:|.:.|:             :..|...::|.|:||...|....|.||||:::.:|:.....
Mosquito   807 NVWNLLTNTAQWAAAANAKGEQGGSASPNTTQQLLDLLVQLGYCNYDNALLGPVLREYLLAGHRR 871

  Fly   843 KAIEAFEEICQKYKSTPWKNELACRLI------QKED------AANLQKLTDLSTGIHGEVNSLY 895
            .||:.|:.|..:.:.||.:.|:...|:      |:||      .|.|.:...:.:.|||.||:..
Mosquito   872 AAIDEFKRIATEKRRTPLQLEIMTLLVELTNGQQQEDISPAEAKALLSETIQIVSQIHGPVNTNN 936

  Fly   896 DLVFSFVECGRVRQARKILETPGLRTRPQRINSACDRYKNEGLLQPLEGLIEATKDLGHIDRNKI 960
            .|:.:....|...|.|::|..|.:|...:.|.:.|:.....|.|:|:..|.:..|.|.::..:..
Mosquito   937 TLIVALAVGGTEAQLRRMLINPEVRVNHEYILTQCEFLVGSGKLEPVLRLAKCAKGLANVRESDF 1001

  Fly   961 YYTLLLSYDKADEAEKALGLWTKMQEE----NVTPNDAFLLKLAEILSKKNIDVP 1011
            ....|..|.:.:..|.|:.|:.::.:|    .:|..  |..||:::|...|.::|
Mosquito  1002 LQLALGQYVRDNNCEAAVQLFQRLLDEGDELKITTE--FARKLSDLLEANNYELP 1054

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bsfNP_523596.2 PPR repeat 142..169 CDD:276811 11/26 (42%)
PLN03218 <163..>261 CDD:215636 27/103 (26%)
PPR repeat 177..204 CDD:276811 7/26 (27%)
PPR repeat 210..239 CDD:276811 9/28 (32%)
PPR_2 213..257 CDD:463778 13/43 (30%)
PPR repeat 245..274 CDD:276811 9/32 (28%)
Pterin_binding <456..>543 CDD:444759 18/99 (18%)
LapB <661..855 CDD:442196 53/209 (25%)
PPR repeat 681..704 CDD:276811 5/22 (23%)
PPR repeat 710..739 CDD:276811 6/28 (21%)
PPR repeat 780..818 CDD:276811 13/50 (26%)
PPR repeat 825..854 CDD:276811 10/28 (36%)
Lrpprc2XP_321013.5 None

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