DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS26 and LOC100360508

DIOPT Version :9

Sequence 1:NP_001260537.1 Gene:RpS26 / 35098 FlyBaseID:FBgn0261597 Length:114 Species:Drosophila melanogaster
Sequence 2:XP_002728047.3 Gene:LOC100360508 / 100360508 RGDID:2321949 Length:115 Species:Rattus norvegicus


Alignment Length:107 Identity:88/107 - (82%)
Similarity:95/107 - (88%) Gaps:0/107 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTKKRRNGGRNKHNRGHVKPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASIWDSYVLP 65
            |||||||.||.|..||||:|:||||||||||||||||||||||||||||||||:|||::|:||||
  Rat     1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLP 65

  Fly    66 KLYAKLHYCVSCAIHSKVVRNRSREARRIRTPPLRSFPKDMA 107
            |||.|||||||||||||||||||||||:.||||.|..|...|
  Rat    66 KLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFRPAGAA 107

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS26NP_001260537.1 Ribosomal_S26e 1..105 CDD:396032 87/103 (84%)
LOC100360508XP_002728047.3 Ribosomal_S26e 1..101 CDD:396032 85/99 (86%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 182 1.000 Domainoid score I3365
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H37420
Inparanoid 1 1.050 183 1.000 Inparanoid score I3862
OMA 1 1.010 - - QHG62164
OrthoDB 1 1.010 - - D1591366at2759
OrthoFinder 1 1.000 - - FOG0001237
OrthoInspector 1 1.000 - - otm45953
orthoMCL 1 0.900 - - OOG6_100814
Panther 1 1.100 - - LDO PTHR12538
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X694
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1211.980

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