DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fas3 and Nectin4

DIOPT Version :10

Sequence 1:NP_001097174.1 Gene:Fas3 / 35097 FlyBaseID:FBgn0000636 Length:577 Species:Drosophila melanogaster
Sequence 2:NP_082169.2 Gene:Nectin4 / 71740 MGIID:1918990 Length:508 Species:Mus musculus


Alignment Length:537 Identity:113/537 - (21%)
Similarity:189/537 - (35%) Gaps:144/537 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LTWAQVNVEPNTALLNEGDRTELL--CRYGRSINYCRIEIPG-EQKVLNLSPEWSKTPGFTYFGA 78
            :.||:  |:|     |||.|...|  .:||..:|      |. |.:|....|......|      
Mouse    64 VAWAR--VDP-----NEGIRELALLHSKYGLHVN------PAYEDRVEQPPPPRDPLDG------ 109

  Fly    79 GLTAGQCGVSIERVKASNNGQVKCSLGVEGEELSGTIDLVVALRPQQPIIELLS--RPNREGYFN 141
                   .|.:.....::.|:.:|.:....   :|:....:.||...|.:..|:  .|..||   
Mouse   110 -------SVLLRNAVQADEGEYECRVSTFP---AGSFQARMRLRVLVPPLPSLNPGPPLEEG--- 161

  Fly   142 EGTEFRARCSVRDGRPPANISWYIDNMPANKRTTPLEVMSSTNDNVELSTSVQEIQWHLSPEDS- 205
            :|....|.|:. :|.|..:::|          .|.::...|:.......::....::||.|..| 
Mouse   162 QGLTLAASCTA-EGSPAPSVTW----------DTEVKGTQSSRSFTHPRSAAVTSEFHLVPSRSM 215

  Fly   206 -NRKLVCRSHHQ---TDRESVPPQEAAYIINVRYAPVHQPDAAVYGLYLEHT-------AIVNIT 259
             .:.|.|...|.   .||......:.|::          .:|:|.||..::.       |.:...
Mouse   216 NGQPLTCVVSHPGLLQDRRITHTLQVAFL----------AEASVRGLEDQNLWQVGREGATLKCL 270

  Fly   260 IRASPQPKIEWT-IDGAIVGQGRTDGRYSAYEPQYLGNDEYNVTLAIAGLTLEDTTKIYNLRASN 323
            ....|.||..|| :||.:....|..|.                ||....||.|. :.:|....||
Mouse   271 SEGQPPPKYNWTRLDGPLPSGVRVKGD----------------TLGFPPLTTEH-SGVYVCHVSN 318

  Fly   324 ELGLTDYQVRIS-SSSKPPSSSLDVAA----IVGIVVAVAVLVLVVLLIVFARATGRWCFGGKSI 383
            ||...|.||.:. ...:.|...:|:.:    |||::.|:...:|||::::.:|...|        
Mouse   319 ELSSRDSQVTVEVLDPEDPGKQVDLVSASVIIVGVIAALLFCLLVVVVVLMSRYHRR-------- 375

  Fly   384 KTPTNETQIDKQLELGAQQNHGQNVALLETPNGITLLGASKLREVNGNGNGNGQQDRLSVERRHH 448
                ...|:.::.|                 ..:||...:.:|.::.:.:....|...||..|..
Mouse   376 ----KAQQMTQKYE-----------------EELTLTRENSIRRLHSHHSDPRSQPEESVGLRAE 419

  Fly   449 DEDDSFE-------YGTDRESSVYN--PTTRPL--KSILMSQAAGRNSRSSASDKDEG------- 495
            ...||.:       ...:.|...|:  .|.|.:  ::.|:|..:||....  .|:|||       
Mouse   420 GHPDSLKDNSSCSVMSEEPEGRSYSTLTTVREIETQTELLSPGSGRTEED--DDQDEGIKQAMNH 482

  Fly   496 --NENADLLQKGNQLGI 510
              .||..|..|....||
Mouse   483 FVQENGTLRAKPTGNGI 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fas3NP_001097174.1 C2-set_2 141..222 CDD:400489 17/85 (20%)
Ig strand B 146..150 CDD:409353 1/3 (33%)
Ig strand C 160..164 CDD:409353 0/3 (0%)
Ig strand E 194..198 CDD:409353 0/3 (0%)
Ig strand F 208..213 CDD:409353 2/4 (50%)
Ig strand G 226..229 CDD:409353 0/2 (0%)
Ig 253..326 CDD:472250 19/80 (24%)
Nectin4NP_082169.2 Ig 37..145 CDD:472250 23/109 (21%)
Ig strand B 47..51 CDD:409353
Ig strand C 63..67 CDD:409353 0/2 (0%)
Ig strand E 109..113 CDD:409353 2/16 (13%)
Ig strand F 123..128 CDD:409353 1/4 (25%)
Ig strand G 137..140 CDD:409353 0/2 (0%)
IgC1_2_Nectin-3-4_like 148..241 CDD:409501 21/106 (20%)
Ig strand A 148..154 CDD:409501 1/5 (20%)
Ig strand B 166..173 CDD:409501 2/7 (29%)
Ig strand C 177..183 CDD:409501 1/15 (7%)
Ig strand C' 185..187 CDD:409501 0/1 (0%)
Ig strand D 189..196 CDD:409501 1/6 (17%)
Ig strand E 201..209 CDD:409501 0/7 (0%)
Ig strand F 219..226 CDD:409501 2/6 (33%)
Ig strand G 232..238 CDD:409501 2/5 (40%)
Ig 265..328 CDD:409353 22/79 (28%)
Ig strand B 265..269 CDD:409353 1/3 (33%)
Ig strand C 278..282 CDD:409353 1/3 (33%)
Ig strand E 298..301 CDD:409353 2/2 (100%)
Ig strand F 311..316 CDD:409353 1/4 (25%)
Ig strand G 325..328 CDD:409353 1/2 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 398..445 8/46 (17%)
Blue background indicates that the domain is not in the aligned region.

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