DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fas3 and nphs1

DIOPT Version :10

Sequence 1:NP_001097174.1 Gene:Fas3 / 35097 FlyBaseID:FBgn0000636 Length:577 Species:Drosophila melanogaster
Sequence 2:XP_073779348.1 Gene:nphs1 / 692352 ZFINID:ZDB-GENE-051102-1 Length:1287 Species:Danio rerio


Alignment Length:580 Identity:113/580 - (19%)
Similarity:186/580 - (32%) Gaps:186/580 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 EPNTALLNEGDRTELLCRYGRSI-------------------NYCRIEIPGEQKVLNLSPEWSKT 70
            ||....:..|....|.|...|:.                   .|.|..:.|:||           
Zfish    77 EPRNVTVRAGATALLKCEVLRASGAVQWVKDGLLLGPLRSLPGYPRYSMTGDQK----------- 130

  Fly    71 PGFTYFGAGLTAGQCGVSIERVKASNNGQVKCSLGVEGEE---LSGTIDLVVALRPQQPIIELLS 132
                       .||..:.|..|...::|..:|.:|.....   :|.|:.|.|.:...||..:|.|
Zfish   131 -----------KGQYHLQILDVTLEDDGPYECQVGRSESSRPIVSRTVWLNVQIPSSQPYFQLES 184

  Fly   133 RPNREGYFNEGTEFRARCSVRDGRPPANISWYIDN---MPANKRTTPLEVMSSTNDNVELSTSVQ 194
                |..:.||.::...|...|.:|||.|:.:.|.   :.:...|     ||.:.|  :|..:..
Zfish   185 ----EEPWVEGEQYTVTCIAPDAKPPAEITMFRDGEELLESESYT-----MSGSQD--KLQNTHA 238

  Fly   195 EIQWHLSPEDSNRKLVCRSHHQTDRESVPPQEAAYIINVRYAPVHQPDAAVYGLYLEHT------ 253
            |:.......|..|:|.||:.:.....::   |....:.| |.|...|  .:.||..|..      
Zfish   239 EVTIRARSSDDTRRLTCRAKNPASPRAL---ETGMTMKV-YFPPQAP--MIMGLENEEVKAGSFL 297

  Fly   254 AIVNITIRASPQPKIEWTIDGAIVG------------------QGRTDGRYSAYEPQYLGNDEYN 300
            .:|.::...:|...:.||.:|.::.                  :.:.:..::..:.|.:.    .
Zfish   298 KVVCMSYGGNPLATLHWTKNGEVLSTSWDVDFVSRRASSVLKMEVKPEDNHAVLQCQSIN----Q 358

  Fly   301 VTLAIAGLTLEDTTKIYNLRASNELG----LTDYQVRIS---SSSKPPSSSLDVAAIVGIVVAVA 358
            ||.:...|| ...|.::.......||    :...::.:|   |||.||         |.|     
Zfish   359 VTRSPMSLT-RTLTVLFEPAEVTLLGSFEAVEGEEINLSCSTSSSNPP---------VHI----- 408

  Fly   359 VLVLVVLLIVFARATGRWCFGGKSIKTPTNETQIDKQLELGAQQNHGQNVALLETPNGITLLGAS 423
                            ||..|.|.:    |.|:                |...|..||..:..::
Zfish   409 ----------------RWWLGFKEL----NRTE----------------VTFAEGDNGGMMTVSN 437

  Fly   424 KLREVNGNGNGNGQQDRLSVERRHHDEDDSFEYGTDRESSVYNPTTRPLKSILMSQAAGRNSRSS 488
            ...:|:...||      ||::....::...|......|..||.|   |.|..|            
Zfish   438 LTHKVSREDNG------LSLQCEAFNKGTRFSSVRAAELIVYYP---PQKVWL------------ 481

  Fly   489 ASDKDEGNENADLLQKGNQL--------GIPESRFSRWLPKDQRELIEKQAMLLSGRGKS 540
                |....|. .|..|:.|        |.|..:.: || |:.:.::.....:.|.||.|
Zfish   482 ----DAPPPNV-FLHSGSTLRLVCFSSGGNPTGQLT-WL-KNNKVVLTASKQVSSERGVS 534

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fas3NP_001097174.1 C2-set_2 141..222 CDD:400489 20/83 (24%)
Ig strand B 146..150 CDD:409353 0/3 (0%)
Ig strand C 160..164 CDD:409353 1/3 (33%)
Ig strand E 194..198 CDD:409353 1/3 (33%)
Ig strand F 208..213 CDD:409353 2/4 (50%)
Ig strand G 226..229 CDD:409353 1/2 (50%)
Ig 253..326 CDD:472250 11/96 (11%)
nphs1XP_073779348.1 None

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