DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fas3 and Ncr3

DIOPT Version :10

Sequence 1:NP_001097174.1 Gene:Fas3 / 35097 FlyBaseID:FBgn0000636 Length:577 Species:Drosophila melanogaster
Sequence 2:XP_006256116.3 Gene:Ncr3 / 294251 RGDID:727881 Length:244 Species:Rattus norvegicus


Alignment Length:153 Identity:38/153 - (24%)
Similarity:57/153 - (37%) Gaps:46/153 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   427 EVNGNGNGNGQQDRLSVERRHHDEDDSFEYGTDRESSVYNPTTRPLKSILMSQAAGRNSRSSASD 491
            ||.|.|.|.|...||.||:.           ..:::|...|......|:|:.......|..|.:.
  Rat   114 EVLGLGVGTGNGTRLVVEKE-----------PPQQASNAEPERAAYTSLLLRAGVYALSFLSVAT 167

  Fly   492 KD----EGNENADLLQK--GNQLGIPESRFSRWLPKDQRELIEKQAMLLSGRGKSTAPATPPKPQ 550
            ..    :|  ..:||.:  |.:.|..:.:        :|||   :|:.||    |.:||.||:  
  Rat   168 GSVIYYQG--KCELLSRGMGTEKGGTDCK--------RREL---RAVTLS----SPSPAIPPQ-- 213

  Fly   551 RPPMGTTTTATTTTTPTTPKLPQ 573
                      .:.|..|.|.|||
  Rat   214 ----------VSVTWETPPLLPQ 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fas3NP_001097174.1 C2-set_2 141..222 CDD:400489
Ig strand B 146..150 CDD:409353
Ig strand C 160..164 CDD:409353
Ig strand E 194..198 CDD:409353
Ig strand F 208..213 CDD:409353
Ig strand G 226..229 CDD:409353
Ig 253..326 CDD:472250
Ncr3XP_006256116.3 Ig 21..132 CDD:472250 9/17 (53%)
Ig strand B 38..42 CDD:409520
Ig strand C 55..59 CDD:409520
Ig strand E 94..98 CDD:409520
Ig strand F 108..113 CDD:409520
Ig strand G 123..126 CDD:409520 1/2 (50%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.