DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5790 and AT4G16970

DIOPT Version :9

Sequence 1:NP_001286037.1 Gene:CG5790 / 35095 FlyBaseID:FBgn0032677 Length:665 Species:Drosophila melanogaster
Sequence 2:NP_193430.3 Gene:AT4G16970 / 827405 AraportID:AT4G16970 Length:889 Species:Arabidopsis thaliana


Alignment Length:637 Identity:157/637 - (24%)
Similarity:253/637 - (39%) Gaps:154/637 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 ERFVPMASGTMPSVSGTNHHSRHQQLLLQQAP--------KCTADL----NEKLVKINRQNANKE 112
            :|.:|:    .||.:..|......|..|.|..        .|:.::    ..|:::..:||.|  
plant   321 DRELPL----KPSATEANQDKSLVQKTLDQCKLPGNSKTYSCSPEIKHTRKSKVIQKRKQNFN-- 379

  Fly   113 LSTIQAKDMQSVDKNEEALKELQESIPEINKIFDVHCRI---GSGTFSTVLLGTLQRERGLVETQ 174
              |::.||.:...|:        .:||:    ||.:..:   |||.:..|...|.       :|.
plant   380 --TVRLKDQKDQAKH--------NTIPD----FDSYTIVEEEGSGGYGIVYKATR-------KTD 423

  Fly   175 RRRFAIKHHNPTNHPERILRELECMYRIGGVENVIGINCCIRYNDNVAFIMPYMTHDRFHDIYRS 239
            ...||||..:.......:..|:..:.|.||...:|....|::..|:...|:.::.|||...:.|.
plant   424 GTEFAIKCPHVGAQKYYVNNEIRMLERFGGKNCIIKHEGCLKNGDSDCIILEHLEHDRPDSLKRE 488

  Fly   240 LNFPEIRDYLRNLLIALRHVHKFNVIHRDVKPSNILYNRRTGKFLLCDFGLAQ------RIADDG 298
            ::..:::.|...:..||..:||..|:||||||.|.|::|:|.|..|.||.||.      |.||..
plant   489 IDVYQLQWYGYCMFKALSSLHKQGVVHRDVKPGNFLFSRKTNKGYLIDFNLAMDLHQKYRRADKS 553

  Fly   299 SVVQSSDLSSREVFSILRDLE------NGRSVTLTDGNSAQAEAEDYMARRRMR---------AL 348
            ........:|::..::::.|:      |..|......||.:..|....||..|.         |.
plant   554 KAASGLPTASKKHHTLVKSLDAVNRGTNKPSQKTLAPNSIKKAAGKTRARNDMTRWERLNSQGAE 618

  Fly   349 GGGGSVERAVTGP---PSIQKLREQAGGH----------------LTKKDVANQRADTMR----- 389
            |.|.:..:.||..   ||.:|.||....|                :...:|:::...:||     
plant   619 GSGLTSAKDVTSTRNNPSGEKRREPLPCHGRKALLDFLQETMSVPIPNHEVSSKAPTSMRKRVAA 683

  Fly   390 ----------LLNRLRLVSPNADPNNYVVSTNTSKKEMHASRAGTPGYRPPEVLLRYPKQSTAVD 444
                      .|..:.|.|........|:    .||:...|  ||.|:|.|||..|...|...:|
plant   684 LPGKAEKELLYLTPMPLCSNGRPEAGDVI----EKKDGPCS--GTKGFRAPEVCFRSLHQGPKID 742

  Fly   445 VWAAGVIMLSLLSGLHPFFKAPHDCGALAEIINLFGDMPVRKTAFLLDRLILLAQKVNTLDLRRV 509
            ||:|||.:|.|:.|..||...|..  .:.:|..|.|...:.:.|.|.:|                
plant   743 VWSAGVTLLYLIMGRTPFTGDPEQ--NIKDIAQLRGSEELWEVAKLHNR---------------- 789

  Fly   510 CMRFRHADFFLAPEIQRKYQRPDGTTEMCRSCEQPTFNCLCSNSGHNLERYDGLDIFPAVAYDLL 574
                  ...|.....:.:|.:   ..|:.:.||.            |.:|.:.||:.|....||:
plant   790 ------ESSFPKELYESRYLK---GMELRKWCEL------------NTKRREFLDVIPLSLLDLV 833

  Fly   575 SRLLEVNPQKRITAEEALKHPFFSDQHRITPGIPLHQ---QQLIMHQQQHIM 623
            .:.|.|||::||:||:||||.||.         |:|:   .|:::.||..::
plant   834 DKCLTVNPRRRISAEDALKHDFFH---------PVHETLRNQMLLKQQPTVV 876

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5790NP_001286037.1 STKc_Cdc7 143..597 CDD:270921 131/511 (26%)
S_TKc 145..597 CDD:214567 131/509 (26%)
PKc_like <238..>363 CDD:304357 41/148 (28%)
PKc_like <364..>462 CDD:304357 32/128 (25%)
PKc_like <427..597 CDD:304357 48/169 (28%)
AT4G16970NP_193430.3 PKc_like 401..856 CDD:304357 129/506 (25%)
S_TKc 401..856 CDD:214567 129/506 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 72 1.000 Domainoid score I3316
eggNOG 1 0.900 - - E1_KOG1167
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003769
OrthoInspector 1 1.000 - - otm3508
orthoMCL 1 0.900 - - OOG6_103228
Panther 1 1.100 - - LDO PTHR11909
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2628
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
109.770

Return to query results.
Submit another query.