DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ptp36E and ptprua

DIOPT Version :9

Sequence 1:NP_001286033.1 Gene:Ptp36E / 35091 FlyBaseID:FBgn0267486 Length:682 Species:Drosophila melanogaster
Sequence 2:XP_005159609.1 Gene:ptprua / 563584 ZFINID:ZDB-GENE-060503-232 Length:1478 Species:Danio rerio


Alignment Length:571 Identity:182/571 - (31%)
Similarity:307/571 - (53%) Gaps:36/571 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 KNNLEKNQNPKCIPYDYNRVVLEKVGGLQDSDYVNASYVDSLL------KPNAYIVTQGPVEETV 181
            |.:..|.::...:..|.:||.:..:....:||||||:|:|..:      :.|.:|.||||.::.:
Zfish   919 KKDKTKGRHDTLLGQDRHRVKMHSLLADPNSDYVNANYIDIRINREGYQRSNHFIATQGPKQDMI 983

  Fly   182 QAYWRMVWQENISAIVMLTKTFDFAKVMCHQYWPPNMEVHEQYGDIFINIVREEQLANFHIRTFR 246
            ..:||||||||..:|||:||..:..::.|.:|||.:.|:   ||||.|.:::.|.||.:.:|||.
Zfish   984 YDFWRMVWQENCYSIVMITKLVEVGRMKCCKYWPDDSEL---YGDIKITLLKTETLAEYTVRTFA 1045

  Fly   247 LYKMNEKQEVTDERLILQFHYTEWYSHSCPF-SNALLEFRRRVRLVVGNIIKDEDDMRGPILVHC 310
            :    |::....:..:.|||:|.|..|..|: :..||.|.|||:       .......||::|||
Zfish  1046 M----ERRGYPAKHEVCQFHFTSWPEHGVPYHATGLLAFLRRVK-------ASTPPDAGPVVVHC 1099

  Fly   311 SDGGGRSGVYMSIDANLELAEEEECFNVFGYLKKLRQSRKGLVENVEQYKFIYDTLEEHIICGKT 375
            |.|.||:|.|:.:|..|::||.|...:::..:|.|...|..:::..|||.||:|.:.|..:||:|
Zfish  1100 SMGAGRTGCYIVLDVMLDMAECEGVVDIYNCVKTLCSRRINMIQTEEQYIFIHDAILEACLCGET 1164

  Fly   376 WFPVSELSDRLKAKARRNSGTKMNEYQAEYDQICKQTPRFTIGDCAGGHRADNREKNRDVLCVPP 440
            ..|::|.....|.....:|.|..::.:.|:..:...||...:.:|:......||||||.:..:||
Zfish  1165 AIPITEFGLSYKDMLSVDSQTNTSQLREEFQTLNSVTPHLDVEECSVSLLPRNREKNRSMDVLPP 1229

  Fly   441 DNFRPYLTSFQGNAFTDYINSVFVDGYTKPREYIVTEWPMKHTLGEFWSLVYDQECSAVVVLCQP 505
            |....:|.|.:|:. .:|||:..:|.:.:|..::||..|:..|..:||.||:|..|:::|:|.|.
Zfish  1230 DRALAFLVSNEGDG-NNYINAALMDSFLQPAAFVVTPHPLPTTTTDFWRLVFDYGCTSIVMLNQL 1293

  Fly   506 PSQSQQYP--SFWPNKSKMEKYGPVFSVHYVMSKSYTNIKQWEFKINKKIVSLTEMMAGVKAPTR 568
            ...:..:|  .:|| ::.|::|||: :|..:...:..|:....|::|.......|.:....|.:|
Zfish  1294 NQSNSAWPCLQYWP-ETGMQQYGPM-TVELLSRSTDENVVTRLFRVNNITRDPRENLPCWNADSR 1356

  Fly   569 ----------TVQLFQLTCWPMGHKVPSSTNSLVYLMNMVEIWRNKVDYGPVCVVSPDGRSRAGV 623
                      .|:.||...|....::|.|..:.:.|:..|:.|:.:...|...|...:|..|:|.
Zfish  1357 IPKKLQEGHLVVRHFQFLRWSAYREIPDSKKAFLNLLAQVQKWQRECGDGRTIVHCLNGGGRSGT 1421

  Fly   624 YCAANACIEQVIQHGEVDVFQAVKTVRRHRPQLVENMTEYKYCYDLVLHYV 674
            :||....:|.|..|..||||.||||:|..:|.:||:|.:|::||:|.|.|:
Zfish  1422 FCACTMIMEMVHHHNMVDVFYAVKTLRNSKPNMVESMEQYRFCYELALEYL 1472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp36ENP_001286033.1 Y_phosphatase 125..368 CDD:395053 86/249 (35%)
Y_phosphatase 428..671 CDD:395053 80/254 (31%)
ptpruaXP_005159609.1 MAM 26..186 CDD:279023
MAM 26..184 CDD:99706
I-set 188..281 CDD:254352
FN3 285..356 CDD:214495
FN3 385..485 CDD:238020
FN3 494..589 CDD:238020
Y_phosphatase 922..1157 CDD:278528 86/248 (35%)
PTPc 934..1157 CDD:238006 85/236 (36%)
PTPc 1189..1470 CDD:214550 84/283 (30%)
PTPc 1219..1470 CDD:238006 78/253 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 145 1.000 Domainoid score I4517
eggNOG 1 0.900 - - E2759_KOG4228
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D20096at33208
OrthoFinder 1 1.000 - - FOG0000829
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
76.780

Return to query results.
Submit another query.