DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp36E and ptprc

DIOPT Version :9

Sequence 1:NP_001286033.1 Gene:Ptp36E / 35091 FlyBaseID:FBgn0267486 Length:682 Species:Drosophila melanogaster
Sequence 2:XP_021325269.1 Gene:ptprc / 559154 ZFINID:ZDB-GENE-050208-585 Length:1229 Species:Danio rerio


Alignment Length:629 Identity:190/629 - (30%)
Similarity:297/629 - (47%) Gaps:91/629 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 PNGPIDIRHFLKLCDLRRKFPVLYKLEFQTAAKVESN-TCRHALKKNNLEKNQNPKCIPYDYNRV 142
            |:|.|| .:..|:.|..|    |:..|||:..::.:| |.:.|.:..|..||:....:|||||||
Zfish   544 PDGLID-AYRTKIADESR----LFMDEFQSIPRIFNNYTIKEAKRPENQSKNRYVDILPYDYNRV 603

  Fly   143 VLEKVGGLQDSDYVNASYVDSLLKPNAYIVTQGPVEETVQAYWRMVWQENISAIVMLTKTFDFAK 207
            .|.. |..  .||:|||:::...:|..||..|||.:||:..:|:|:|::..|.|||:|:..:..|
Zfish   604 TLSS-GSY--GDYINASFIEGYQEPKKYIAAQGPKDETIVDFWQMMWEQKSSIIVMVTRCEEGNK 665

  Fly   208 VMCHQYWPPNMEVHEQYGDIFINIVREEQLANFHIRTFRLYKMNEKQEVTDERLILQFHYTEWYS 272
            |.|.||||......|.:.|..:.|..||...::.||...|   ..|:|...||.|....:..|..
Zfish   666 VKCAQYWPCLDRETEIFDDFVVKIKTEEHCPDYIIRHLVL---ANKREKASEREITHIQFISWPD 727

  Fly   273 HSCPFS-NALLEFRRRVRLVVGNIIKDEDDMRGPILVHCSDGGGRSGVYMSIDANLELAEEEECF 336
            |..|.. ..||:.||||     |..|  :...|||:||||.|.||:|.|:.|||.:|..|.|...
Zfish   728 HGVPTDPGQLLKLRRRV-----NSFK--NFFSGPIVVHCSAGVGRTGTYIGIDAMIESLEAENRV 785

  Fly   337 NVFGYLKKLRQSRKGLVENVEQYKFIYDTLEEHIICGKTWFPVSELSDRLKAKARRNSGTKMNEY 401
            :::|::.|||:.|..:|:...||..|:..|.||...|:|...:||....|.....:.....:.|.
Zfish   786 DIYGFVAKLRRQRCLMVQVEAQYILIHTALIEHNQFGETEILLSEFHSVLNTIREKQGNESIMEI 850

  Fly   402 QAEYDQICKQTPRF----TIGDCAGGHRADNREKNRDVLCVPPDNFRP-YLTSFQGNAFTD---- 457
            :.:      :.|:|    ||..   |...:|::||||...:|.|..|. :.....||..:|    
Zfish   851 EFQ------KLPKFKNWRTINT---GSSEENKDKNRDSKVIPYDYNRVLFRLDIAGNQTSDPEDD 906

  Fly   458 -------------YINSVFVDGYTKPREYIVTEWPMKHTLGEFWSLVYDQECSAVVVL--CQPPS 507
                         |||:.|:|||...:..|..:.|:.:|..||..::|.|:...||:|  ||...
Zfish   907 TYSSDEEEEESNEYINASFLDGYWCQKSLIAAQGPLPNTTAEFLLMLYQQQTKTVVMLTDCQEDG 971

  Fly   508 QS--QQYPSFWPNKSKMEKYGPVFSVHYVMSKSY-TNIKQ-WEFKINKK--IVSLTEMMAGVKAP 566
            :.  .||   |.::.|:  :|.: .:....::|: |.:|: .|.:..||  |:.|.:        
Zfish   972 KDLCSQY---WGDEKKV--FGDM-EIEVKKTESFPTYVKRHLEIQSTKKNEILELDQ-------- 1022

  Fly   567 TRTVQLFQLTCWPMGHKVPSSTNSLVYLMNMVEIWRNKVDYG--------PVCVVSPDGRSRAGV 623
                  :|...| ...::|.:...|:   .|::..|....|.        |:.|...:|.||.|:
Zfish  1023 ------YQFLKW-KSSELPENAQELI---EMIKNIRENGKYDNSKKNRSIPIVVHCSNGSSRTGL 1077

  Fly   624 YCAANACIEQVIQHGEVDVFQAVKTVRRHRPQLVENMTEYKYCY 667
            :||....::..:....|||||.||.:|:.|..:||...:|::.|
Zfish  1078 FCALWNLMDCSLTEKLVDVFQVVKNLRKERQGMVETFEQYQFLY 1121

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp36ENP_001286033.1 Y_phosphatase 125..368 CDD:395053 92/243 (38%)
Y_phosphatase 428..671 CDD:395053 71/274 (26%)
ptprcXP_021325269.1 FN3 395..476 CDD:214495
PTPc 561..817 CDD:214550 99/268 (37%)
PTPc 874..1125 CDD:238006 70/272 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4228
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 294 1.000 Inparanoid score I2746
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.950

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