DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp36E and Ptprk

DIOPT Version :9

Sequence 1:NP_001286033.1 Gene:Ptp36E / 35091 FlyBaseID:FBgn0267486 Length:682 Species:Drosophila melanogaster
Sequence 2:NP_001025073.2 Gene:Ptprk / 360302 RGDID:619706 Length:1439 Species:Rattus norvegicus


Alignment Length:598 Identity:210/598 - (35%)
Similarity:326/598 - (54%) Gaps:40/598 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 LKLCDLRRKFPVL-------YKLEFQTAAKVESNTCRHALKKNNLEKNQNPKCIPYDYNRVVLEK 146
            :::.||.:...::       :|.|:::..:.:|.:...|.|..|..||:....|.||::||:|:.
  Rat   867 IRVADLLQHINLMKTSDSYGFKEEYESFFEGQSASWDVAKKDQNRAKNRYGNIIAYDHSRVILQP 931

  Fly   147 VGGLQDSDYVNASYVDSLLKPNAYIVTQGPVEETVQAYWRMVWQENISAIVMLTKTFDFAKVMCH 211
            |.....|||:||:|:|...:|:.||.|||||.|||..:|||||||..:.|||:|...:..:|.|:
  Rat   932 VEDDPSSDYINANYIDGYQRPSHYIATQGPVHETVYDFWRMVWQEQSACIVMVTNLVEVGRVKCY 996

  Fly   212 QYWPPNMEVHEQYGDIFINIVREEQLANFHIRTFRLYKMNEKQEVTDERLILQFHYTEWYSHSCP 276
            :|||.:.||   |||..:..|..|.||.:.:|||.|    |::...:.|.:.|||:|.|..|..|
  Rat   997 KYWPDDTEV---YGDFKVTCVEMEPLAEYVVRTFTL----ERRGYNEIREVKQFHFTGWPDHGVP 1054

  Fly   277 F-SNALLEFRRRVRLVVGNIIKDEDDMRGPILVHCSDGGGRSGVYMSIDANLELAEEEECFNVFG 340
            : :..||.|.|||:|       ......|||:||||.|.||:|.|:.||..|::||.|...:::.
  Rat  1055 YHATGLLSFIRRVKL-------SNPPSAGPIVVHCSAGAGRTGCYIVIDIMLDMAEREGVVDIYN 1112

  Fly   341 YLKKLRQSRKGLVENVEQYKFIYDTLEEHIICGKTWFPVSELSDRLKAKARRNSGTKMNEYQAEY 405
            .:|.||..|..:|:..|||.||:|.:.|..:||:|..||.|.........|.:|.|..:..:.|:
  Rat  1113 CVKALRSRRINMVQTEEQYIFIHDAILEACLCGETAIPVCEFKAAYFDMIRIDSQTNSSHLKDEF 1177

  Fly   406 DQICKQTPRFTIGDCAGGHRADNREKNRDVLCVPPDNFRPYLTSFQGNAFTDYINSVFVDGYTKP 470
            ..:...|||....||:......|.:|||.:..:|||...|:|.:..|.: ::|||:..:|.|.:|
  Rat  1178 QTLNSVTPRLQAEDCSIACLPRNHDKNRFMDMLPPDRCLPFLITIDGES-SNYINAALMDSYRQP 1241

  Fly   471 REYIVTEWPMKHTLGEFWSLVYDQECSAVVVLCQPPSQSQQYPSFWPNKSKMEKYGPVFSVHYVM 535
            ..:|||::|:.:|:.:||.||||..|:::|:| .....||..|.:||.:. |.:|||: .|..:.
  Rat  1242 AAFIVTQYPLPNTVKDFWRLVYDYGCTSIVML-NEVDLSQGCPQYWPEEG-MLRYGPI-QVECMS 1303

  Fly   536 SKSYTNIKQWEFKINK--KIVSLTEMMAGVKAPTRTVQLFQLTCWPMGHKVPSSTNSLVYLMNMV 598
            .....::      ||:  :|.:||....|.    ..||.||...|....:||.|..|.:.|:..|
  Rat  1304 CSMDCDV------INRIFRICNLTRPQEGY----LMVQQFQYLGWASHREVPGSKRSFLKLILQV 1358

  Fly   599 EIWRNKVDYGP--VCVVSPDGRSRAGVYCAANACIEQVIQHGEVDVFQAVKTVRRHRPQLVENMT 661
            |.|:.:.:.|.  ..:...:|..|:|::||....:|.|.:...||||.||||:|..:|.:||...
  Rat  1359 EKWQEECEEGEGRTIIHCLNGGGRSGMFCAIGIVVEMVKRQNVVDVFHAVKTLRNSKPNMVEAPE 1423

  Fly   662 EYKYCYDLVLHYV 674
            :|::|||:.|.|:
  Rat  1424 QYRFCYDVALEYL 1436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp36ENP_001286033.1 Y_phosphatase 125..368 CDD:395053 102/243 (42%)
Y_phosphatase 428..671 CDD:395053 83/246 (34%)
PtprkNP_001025073.2 MAM 31..191 CDD:214533
MAM 35..191 CDD:99706
IG_like 201..287 CDD:214653
Ig 203..283 CDD:299845
fn3 293..371 CDD:278470
FN3 487..588 CDD:238020
PTPc 886..1140 CDD:214550 107/267 (40%)
PTPc 913..1140 CDD:238006 101/240 (42%)
Y_phosphatase 1200..1434 CDD:278528 83/247 (34%)
PTPc 1202..1434 CDD:238006 82/245 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4228
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D20096at33208
OrthoFinder 1 1.000 - - FOG0000829
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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