DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp36E and Lar

DIOPT Version :9

Sequence 1:NP_001286033.1 Gene:Ptp36E / 35091 FlyBaseID:FBgn0267486 Length:682 Species:Drosophila melanogaster
Sequence 2:NP_001260594.1 Gene:Lar / 35259 FlyBaseID:FBgn0000464 Length:2032 Species:Drosophila melanogaster


Alignment Length:649 Identity:195/649 - (30%)
Similarity:306/649 - (47%) Gaps:102/649 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 PNGPIDIRHFLKLCDLRRKFPVLYKLEFQTAAKVE------SNTCRH--ALKKN----------- 124
            |:.|:|:|                :|.|||...:.      |....|  .||.|           
  Fly  1435 PSDPVDMR----------------RLNFQTPGMISHPPIPISEFANHIERLKSNDNQKFSQEYES 1483

  Fly   125 ------------NLE----KNQNPKCIPYDYNRVVLEKVGGLQDSDYVNASYVDSLLKPNAYIVT 173
                        |||    ||:......||::||.|..|.|:..|||:||:|.|...|.|||:.|
  Fly  1484 IEPGQQFTWDNSNLEHNKSKNRYANVTAYDHSRVQLPAVEGVVGSDYINANYCDGYRKHNAYVAT 1548

  Fly   174 QGPVEETVQAYWRMVWQENISAIVMLTKTFDFAKVMCHQYWPPNMEVHEQYGDIFINIVREEQLA 238
            |||::||...:|||.|:...:.|||:|:..:..::.|.||||....  |.||.||:.|...::||
  Fly  1549 QGPLQETFVDFWRMCWELKTATIVMMTRLEERTRIKCDQYWPTRGT--ETYGQIFVTITETQELA 1611

  Fly   239 NFHIRTFRLYKMNEKQEVTDERLILQFHYTEWYSHSCPFSNA-LLEFRRRVRLVVGNIIKDEDDM 302
            .:.||||:|.    :|...|.|.|.|..:|.|..|..|...| .|:|.||.|.:.       ...
  Fly  1612 TYSIRTFQLC----RQGFNDRREIKQLQFTAWPDHGVPDHPAPFLQFLRRCRALT-------PPE 1665

  Fly   303 RGPILVHCSDGGGRSGVYMSIDANLELAEEEECFNVFGYLKKLRQSRKGLVENVEQYKFIYDTLE 367
            .||::||||.|.||:|.|:.||:.||..:.|:..:::|::..||..|..:|:..:||.||:|.:.
  Fly  1666 SGPVIVHCSAGVGRTGCYIVIDSMLERMKHEKIIDIYGHVTCLRAQRNYMVQTEDQYIFIHDAIL 1730

  Fly   368 EHIICGKTWFPVSELSDRLKAKARRNSGTKMNEYQAEYDQICK---QTPRFTIGD--CAGGHRAD 427
            |.||||.|..|...|...|:.......|..::..:.|:.::..   .:.:|...:  |       
  Fly  1731 EAIICGVTEVPARNLHTHLQKLLITEPGETISGMEVEFKKLSNVKMDSSKFVTANLPC------- 1788

  Fly   428 NREKNRDVLCVPPDNFRPYLTSFQGNAFTDYINSVFVDGYTKPREYIVTEWPMKHTLGEFWSLVY 492
            |:.|||.|..:|.::.|.|||...|...:||:|:.|:|||.....||..:.|::....:||.:::
  Fly  1789 NKHKNRLVHILPYESSRVYLTPIHGIEGSDYVNASFIDGYRYRSAYIAAQGPVQDAAEDFWRMLW 1853

  Fly   493 DQECSAVVVLCQPPSQSQQYP-SFWPNKSKMEKYGPVFSVHYVMSKSYTNIKQW---EFKINKKI 553
            :...:.||:|.:.....::.. .:||::..:.     :..:.|...:..|:.|:   |||:    
  Fly  1854 EHNSTIVVMLTKLKEMGREKCFQYWPHERSVR-----YQYYVVDPIAEYNMPQYKLREFKV---- 1909

  Fly   554 VSLTEMMAGVKAPTRTVQLFQLTCWPMGHKVPSSTNSLVYLMNMVEIWRNKVDY---GPVCVVSP 615
               |:...|   .:|||:.||...|| ...||.|....:..:..|.  :.|..:   ||:.|...
  Fly  1910 ---TDARDG---SSRTVRQFQFIDWP-EQGVPKSGEGFIDFIGQVH--KTKEQFGQDGPITVHCS 1965

  Fly   616 DGRSRAGVYCAANACIEQVIQHGEVDVFQAVKTVRRHRPQLVENMTEYKYCYDLVLHYVLHFLN 679
            .|..|:||:...:..:|::...|.:||||.|:.:|..||.:|:...:|.:||...|.|:..|.|
  Fly  1966 AGVGRSGVFITLSIVLERMQYEGVLDVFQTVRILRSQRPAMVQTEDQYHFCYRAALEYLGSFDN 2029

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp36ENP_001286033.1 Y_phosphatase 125..368 CDD:395053 96/247 (39%)
Y_phosphatase 428..671 CDD:395053 69/249 (28%)
LarNP_001260594.1 Ig 35..129 CDD:299845
I-set 36..129 CDD:254352
IG_like 146..227 CDD:214653
Ig 159..228 CDD:299845
I-set 234..318 CDD:254352
Ig3_RPTP_IIa_LAR_like 249..317 CDD:143216
fn3 324..404 CDD:278470
FN3 423..514 CDD:238020
FN3 520..610 CDD:238020
FN3 616..707 CDD:238020
FN3 712..810 CDD:238020
FN3 832..907 CDD:238020
FN3 914..1005 CDD:238020
FN3 1012..1101 CDD:238020
fn3 1106..1198 CDD:278470
PTPc 1476..1731 CDD:214550 96/267 (36%)
PTPc 1503..1731 CDD:238006 93/240 (39%)
PTPc 1763..2022 CDD:214550 72/283 (25%)
PTPc 1791..2022 CDD:238006 68/248 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45443572
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4228
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19134
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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