DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp36E and Ptpra

DIOPT Version :9

Sequence 1:NP_001286033.1 Gene:Ptp36E / 35091 FlyBaseID:FBgn0267486 Length:682 Species:Drosophila melanogaster
Sequence 2:XP_006235068.1 Gene:Ptpra / 25167 RGDID:3450 Length:805 Species:Rattus norvegicus


Alignment Length:682 Identity:194/682 - (28%)
Similarity:341/682 - (50%) Gaps:94/682 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 KTGKHRSR---SSARYDDVEKQQRKSRAIVSIPNTIKLSMLNSGLLSFERIKLEARDENNSLSKT 77
            :.|.|.:.   |:.|.:|||.|        |:|                   |.||  :.|.::.
  Rat   185 QAGSHSNSFRLSNGRTEDVEPQ--------SVP-------------------LLAR--SPSTNRK 220

  Fly    78 IPNGPIDIRHFLKL-CDLRRKFP---VLYKLEFQT--AAKVESNTCRHALKKNNLEKNQNPKCIP 136
            .|..|:|     || .::.|:..   .|::.||..  |..::: ||..|.|:.|.|||:....:|
  Rat   221 FPPLPVD-----KLEEEINRRMADDNKLFREEFNALPACPIQA-TCEAASKEENKEKNRYVNILP 279

  Fly   137 YDYNRVVLEKVGGLQDSDYVNASYVDSLLKPNAYIVTQGPVEETVQAYWRMVWQENISAIVMLTK 201
            ||::||.|..|.|:.||||:|||:::...:.|.:|..|||.||||..:|||:|::|.:.|||:|.
  Rat   280 YDHSRVHLTPVEGVPDSDYINASFINGYQEKNKFIAAQGPKEETVNDFWRMIWEQNTATIVMVTN 344

  Fly   202 TFDFAKVMCHQYWPPNMEVHEQ----YGDIFINIVREEQLANFHIRTFRLYKMNEKQEVTDERLI 262
            ..:..:..|.||||      :|    ||::.:::.....|.::.:|.|.:.::.:......:|||
  Rat   345 LKERKECKCAQYWP------DQGCWTYGNVRVSVEDVTVLVDYTVRKFCIQQVGDVTNRKPQRLI 403

  Fly   263 LQFHYTEWYSHSCPFSN-ALLEFRRRVRLVVGNIIKDEDDMRGPILVHCSDGGGRSGVYMSIDAN 326
            .|||:|.|.....||:. .:|:|.::|:..       .....|.|:||||.|.||:|.::.|||.
  Rat   404 TQFHFTSWPDFGVPFTPIGMLKFLKKVKAC-------NPQYAGAIVVHCSAGVGRTGTFVVIDAM 461

  Fly   327 LELAEEEECFNVFGYLKKLRQSRKGLVENVEQYKFIYDTLEEHIICGKTWFPVSELSDRLKAKAR 391
            |::...|...:|:|::.::|..|..:|:...||.|||..|.||.:.|.|...|:.|...|:....
  Rat   462 LDMMHSERKVDVYGFVSRIRAQRCQMVQTDMQYVFIYQALLEHYLYGDTELEVTSLDTHLQKIYN 526

  Fly   392 RNSGTKMNEYQAEYDQICK---QTPRFTIGDCAGGHRADNREKNRDVLCVPPDNFRPYLTSFQGN 453
            :..||..|..:.|:.::..   |..:...|:...     |.:|||.:..:|.:..|..:...:|.
  Rat   527 KIPGTSNNGLEEEFKKLTSIKIQNDKMRTGNLPA-----NMKKNRVLQIIPYEFNRVIIPVKRGE 586

  Fly   454 AFTDYINSVFVDGYTKPREYIVTEWPMKHTLGEFWSLVYDQECSAVVVLCQPPSQSQQ-YPSFWP 517
            ..|||:|:.|:|||.:...||.::.|:.||:.:||.::::.:..::|:|.:...:.|: ...:||
  Rat   587 ENTDYVNASFIDGYRQKDSYIASQGPLLHTIEDFWRMIWEWKSCSIVMLTELEERGQEKCAQYWP 651

  Fly   518 NKSKMEKYGPVFSVHYVMSKSYTNIKQWE----FKINKKIVSLTEMMAGVKAPTRTVQLFQLTCW 578
            :.. :..||.:          ...:|:.|    :.:...:|:.|.     :..:|.::.|....|
  Rat   652 SDG-LVSYGDI----------TVELKKEEECESYTVRDLLVTNTR-----ENKSRQIRQFHFHGW 700

  Fly   579 P-MGHKVPSSTNSLVYLMNMVEIWRNKVDYGPVCVVSPDGRSRAGVYCAANACIEQVIQHGEVDV 642
            | :|  :||....::.::..|:..:.:....|:.|....|..|.|.:||.:..:|:|...|.:||
  Rat   701 PEVG--IPSDGKGMINIIAAVQKQQQQSGNHPITVHCSAGAGRTGTFCALSTVLERVKAEGILDV 763

  Fly   643 FQAVKTVRRHRPQLVENMTEYKYCYDLVLHYV 674
            ||.||::|..||.:|:.:.:|::||.:|..|:
  Rat   764 FQTVKSLRLQRPHMVQTLEQYEFCYKVVQEYI 795

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp36ENP_001286033.1 Y_phosphatase 125..368 CDD:395053 87/247 (35%)
Y_phosphatase 428..671 CDD:395053 64/248 (26%)
PtpraXP_006235068.1 PHA03255 <18..177 CDD:165513
R-PTPc-A-1 217..512 CDD:350469 105/313 (34%)
R-PTPc-A-2 566..793 CDD:350471 62/244 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4228
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 290 1.000 Inparanoid score I2711
OMA 1 1.010 - - QHG48012
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.870

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