DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ptp36E and Ptprt

DIOPT Version :9

Sequence 1:NP_001286033.1 Gene:Ptp36E / 35091 FlyBaseID:FBgn0267486 Length:682 Species:Drosophila melanogaster
Sequence 2:XP_017172075.1 Gene:Ptprt / 19281 MGIID:1321152 Length:1487 Species:Mus musculus


Alignment Length:599 Identity:198/599 - (33%)
Similarity:318/599 - (53%) Gaps:49/599 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 YKLEFQTAAKVESNTCRHALKKNNLEKNQNPKCIPYDYNRVVLEKVGGLQDSDYVNASYVDSLLK 166
            :|.|::...:.::.:...|.:..|..||:....|.||::||.|..:.|...|||:||:|:|...:
Mouse   915 FKEEYEALPEGQTASWDTAKEDENRNKNRYGNIISYDHSRVRLLVLDGDPHSDYINANYIDGYHR 979

  Fly   167 PNAYIVTQGPVEETVQAYWRMVWQENISAIVMLTKTFDFAK--------------------VMCH 211
            |..||.||||::|||:.:|||:||||.::|||:|...:..:                    |.|.
Mouse   980 PRHYIATQGPMQETVKDFWRMIWQENSASIVMVTNLVEVGRHPAEHTVGTATLGRAASPGMVKCV 1044

  Fly   212 QYWPPNMEVHEQYGDIFINIVREEQLANFHIRTFRLYKMNEKQEVTDERLILQFHYTEWYSHSCP 276
            :|||.:.||   ||||.:.::..|.||.:.||||.:.|.. ..|:.:.||   ||:|.|..|..|
Mouse  1045 RYWPDDTEV---YGDIKVTLIETEPLAEYVIRTFTVQKKG-YHEIRELRL---FHFTSWPDHGVP 1102

  Fly   277 -FSNALLEFRRRVRLVVGNIIKDEDDMRGPILVHCSDGGGRSGVYMSIDANLELAEEEECFNVFG 340
             ::..||.|.|:|:.:       .....|||:||||.|.||:|.:::||..|::||.|...::|.
Mouse  1103 CYATGLLGFVRQVKFL-------NPPEAGPIVVHCSAGAGRTGCFIAIDTMLDMAENEGVVDIFN 1160

  Fly   341 YLKKLRQSRKGLVENVEQYKFIYDTLEEHIICGKTWFPVSELSDRLKAKARRNSGTKMNEYQAEY 405
            .:::||..|..||:..|||.|::|.:.|..:||.|..||.|........:|.:..|..::.:.|:
Mouse  1161 CVRELRAQRVNLVQTEEQYVFVHDAILEACLCGNTAIPVCEFRSLYYNISRLDPQTNSSQIKDEF 1225

  Fly   406 DQICKQTPRFTIGDCAGGHRADNREKNRDVLCVPPDNFRPYLTSFQGNAFTDYINSVFVDGYTKP 470
            ..:...|||....||:.|....|.:|||.:..:|.|...|:|.|..|.: ::|||:..:|.:.:|
Mouse  1226 QTLNIVTPRVRPEDCSIGLLPRNHDKNRSMDVLPLDRCLPFLISVDGES-SNYINAALMDSHKQP 1289

  Fly   471 REYIVTEWPMKHTLGEFWSLVYDQECSAVVVLCQPPSQSQQYPSFWPNKSKMEKYGPVFSVHYVM 535
            ..::||:.|:.:|:.:||.||:|..||:||:|.:..: :|....:||.|:. ..|||: .|.:|.
Mouse  1290 AAFVVTQHPLPNTVADFWRLVFDYNCSSVVMLNEMDT-AQLCMQYWPEKTS-GCYGPI-QVEFVS 1351

  Fly   536 SKSYTNIKQWEFKINKKIVSLTEMMAGVKAPTRTVQLFQLTCWPMGHKVPSSTNSLVYLMNMVEI 600
            :....:|....|:|..        ||..:...|.||..|...||.....|.|..||:.::..:|.
Mouse  1352 ADIDEDIIHRIFRICN--------MARPQDGYRIVQHLQYIGWPAYRDTPPSKRSLLKVVRRLEK 1408

  Fly   601 WRNKVD--YGPVCVVSPDGRSRAGVYCAANACIEQVIQHGEVDVFQAVKTVRRHRPQLVENMTEY 663
            |:.:.|  .|...|...:|..|:|.:||..:..|.:.|...:|||..|||:|.::..:||.:.:|
Mouse  1409 WQEQYDGREGRTVVHCLNGGGRSGTFCAICSVCEMIQQQNIIDVFHIVKTLRNNKSNMVETLEQY 1473

  Fly   664 KYCYDLVLHYVLHF 677
            |:.|::.|.|:..|
Mouse  1474 KFVYEVALEYLSSF 1487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp36ENP_001286033.1 Y_phosphatase 125..368 CDD:395053 99/263 (38%)
Y_phosphatase 428..671 CDD:395053 77/244 (32%)
PtprtXP_017172075.1 MAM 36..193 CDD:214533
fn3 298..364 CDD:365830
FN3 394..484 CDD:238020
fn3 506..581 CDD:365830
R-PTPc-T-1 936..1192 CDD:350478 100/269 (37%)
R-PTPc-T-2 1277..1482 CDD:350482 67/215 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4228
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000829
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.770

Return to query results.
Submit another query.