DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp36E and ptp-4

DIOPT Version :9

Sequence 1:NP_001286033.1 Gene:Ptp36E / 35091 FlyBaseID:FBgn0267486 Length:682 Species:Drosophila melanogaster
Sequence 2:NP_001255470.1 Gene:ptp-4 / 177898 WormBaseID:WBGene00010558 Length:1159 Species:Caenorhabditis elegans


Alignment Length:609 Identity:152/609 - (24%)
Similarity:243/609 - (39%) Gaps:127/609 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 DLRRKFPVLYKLEFQTAAKVESNTC---------RHALKKNNLEKNQNPKCIPYDYNRVVLEKVG 148
            ||.|...:.:|.:||.   :||.|.         .::....|.:||:.......:..|:.|....
 Worm   634 DLNRNDSLKFKTQFQI---LESQTSGIDSVDSGESNSSSDENSQKNRYNNIGAIEATRIRLNSPT 695

  Fly   149 GLQDSDYVNASYVDSLLKPNAYIVTQGPVEETVQAYWRMVWQENISAIVMLTKTFDFAKVMCHQY 213
            |   :||:||:||||..:.||||.||.|:..|...:|.|:|||..:.||.:|...:..|..|.||
 Worm   696 G---NDYINANYVDSCNERNAYIATQAPLPSTFSDFWSMIWQERSNIIVCITNMVEDGKRKCDQY 757

  Fly   214 WPPNMEVHEQYGDIFINIVREEQLANFHIRTFRLYKMNEKQEVTDERLILQFHYTEWYSHSCPFS 278
            ||...:..:.:|:..:.:|.|...|:|..|...|........|  ||.:.|.|:..|..|..|.|
 Worm   758 WPSQQDSPQTFGNYQVTLVSESTNAHFSHRILDLKIAKAVPAV--ERKVHQLHFMGWPDHGVPSS 820

  Fly   279 -NALLEFRRRVRLVVGNIIKDEDDMR--GPILVHCSDGGGRSGVYMSIDANLELAEEEECFNVFG 340
             ..||.|           :....|:.  ||::||||.|.||||.|:.:|:...........||.|
 Worm   821 VFPLLSF-----------VHYTSDIHSTGPVVVHCSAGVGRSGSYILVDSMRRHLISFRRLNVQG 874

  Fly   341 YLKKLRQSRKGLVENVEQYKFIYDTLEEHIICGKTWFPVSELSDR---LKAKARRNSGTKMNEYQ 402
            :|..:|:.|..||:.:|||.|.::.:.:.|..|.|... |:|..|   ..::...|..|:|   |
 Worm   875 HLTHMRRQRAKLVQTLEQYIFCHEAIRQLIRHGITRVH-SDLFMRYLHYLSEENLNGKTRM---Q 935

  Fly   403 AEYDQI--CKQTPRFTIGDCAGGHRADNREKNRDVLCVPPDNFRPYLTSFQGNAFTDYINSVFVD 465
            .:::.|  ||..||..|              ..||:.:|                          
 Worm   936 LQFEDICDCKHQPRCLI--------------ESDVITLP-------------------------- 960

  Fly   466 GYTKPREYIVTEWPMKHTLGEFWSLVYDQECSAVVVLCQPPSQSQQYPSFWPNKSKMEKYGPVFS 530
            ||.:..|::|..|  .:...:.|.|.:.|:...:|:|       .|..|||.........|.:..
 Worm   961 GYHRSDEFMVGSW--GNECEDLWRLTWQQKVQTIVIL-------NQRDSFWRKLPSCIYDGEIQL 1016

  Fly   531 VHYVMSKSYTNIKQWEFKINKKIVSLT--EMMAGVKAPTRTVQLFQLTCWP-----MGHKVP--- 585
            .|   ..::..:::.:.::..:||:::  ::..........||..::|...     :.||.|   
 Worm  1017 QH---GDNFVLLQKDDQQLCVRIVNVSRADLDTDFWREIENVQKQRITYHDAPLLILAHKYPPSV 1078

  Fly   586 ------SSTNSLVYLMNMVEIWRNKVDYGPVCVVSPDGRSRAGVYCAANACIEQVIQHGEVDVFQ 644
                  :||.||..|.|                   |..:.|...|||.....|:...|.|||.|
 Worm  1079 PSPTDSTSTLSLSILFN-------------------DDTALAFSICAATTLACQLETTGCVDVVQ 1124

  Fly   645 AVKTVRRHRPQLVENMTEYKYCYD 668
            .:.:....:..:..:..|.:..|:
 Worm  1125 VLSSYTEIQCGIFASKQEIEIIYE 1148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp36ENP_001286033.1 Y_phosphatase 125..368 CDD:395053 81/245 (33%)
Y_phosphatase 428..671 CDD:395053 46/257 (18%)
ptp-4NP_001255470.1 IG_like <83..120 CDD:214653
FN3 140..232 CDD:238020
FN3 237..326 CDD:238020
FN3 338..435 CDD:238020
PTPc 642..900 CDD:214550 87/276 (32%)
PTPc 675..900 CDD:238006 80/240 (33%)
Y_phosphatase <977..1128 CDD:278528 36/179 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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