DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp36E and ptprm

DIOPT Version :9

Sequence 1:NP_001286033.1 Gene:Ptp36E / 35091 FlyBaseID:FBgn0267486 Length:682 Species:Drosophila melanogaster
Sequence 2:XP_031759627.1 Gene:ptprm / 100127701 XenbaseID:XB-GENE-5958903 Length:1486 Species:Xenopus tropicalis


Alignment Length:659 Identity:204/659 - (30%)
Similarity:336/659 - (50%) Gaps:83/659 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 ENNSLSKTIPNG----------------------------------PIDIRH-------FLKLCD 93
            :.|:||.|:||.                                  |:||.:       .:::.|
 Frog   854 KTNTLSTTVPNSYYPDPFVPTAILDENHTNSETSSLAQPHTYKKRDPVDIPYQTGQLHPAIRVAD 918

  Fly    94 LRRKFPVL-------YKLEFQTAAKVESNTCRHALKKNNLEKNQNPKCIPYDYNRVVLEKVGGLQ 151
            |.:....:       :|.|::|..:.:|.....|.|..|..||:....|.||::||.|:.:....
 Frog   919 LLQHITQMKCAEGYGFKEEYETFFEGQSAPWESAKKDENRMKNRYGNIIAYDHSRVRLQSIEDEA 983

  Fly   152 DSDYVNASYVDSLLKPNAYIVTQGPVEETVQAYWRMVWQENISAIVMLTKTFDFAKVMCHQYWPP 216
            .|||:|.:|||...:||.||.||||::|||..:|||:|.||.::|||:|...:..:|.|.:|||.
 Frog   984 SSDYINGNYVDGYHRPNHYIATQGPMQETVYDFWRMIWHENTASIVMVTNLVEVGRVKCCKYWPD 1048

  Fly   217 NMEVHEQYGDIFINIVREEQLANFHIRTFRLYKMNEKQEVTDERLILQFHYTEWYSHSCPF-SNA 280
            :.|:   |.||.:.::..|.||.:.||||.:    ||:.|.:.|.|.|||:|.|..|..|: :..
 Frog  1049 DTEI---YKDIKVTLIETELLAEYVIRTFAV----EKRGVHEIREIRQFHFTGWPDHGVPYHATG 1106

  Fly   281 LLEFRRRVRLVVGNIIKDEDDMRGPILVHCSDGGGRSGVYMSIDANLELAEEEECFNVFGYLKKL 345
            ||.|.|:|:       .......||::||||.|.||:|.::.||..|::||.|...:::..:::|
 Frog  1107 LLGFVRQVK-------SKNPPNSGPLVVHCSAGAGRTGCFIVIDIMLDMAEREGVVDIYNCVREL 1164

  Fly   346 RQSRKGLVENVEQYKFIYDTLEEHIICGKTWFPVSELSDRLKAKARRNSGTKMNEYQAEYDQICK 410
            |..|..:|:..|||.||:|.:.|..:||.|....|::........:.:..|..::.:.|:..:..
 Frog  1165 RSRRVNMVQTEEQYVFIHDAILEACLCGDTAILASQVRSVYYEMNKVDPQTNSSQIKEEFRTLNM 1229

  Fly   411 QTPRFTIGDCAGGHRADNREKNRDVLCVPPDNFRPYLTSFQGNAFTDYINSVFVDGYTKPREYIV 475
            .||...:.||:......|.||||.:..:|||...|:|.:..|.: ::|||:..:|.|.:|..:||
 Frog  1230 VTPTLRVEDCSIALLPRNHEKNRCMDVLPPDRCLPFLITIDGES-SNYINAALMDSYVQPSAFIV 1293

  Fly   476 TEWPMKHTLGEFWSLVYDQECSAVVVLCQPPSQSQQYPSFWPNKSKMEKYGPVFSVHYVMSKSYT 540
            |:.|:.:|:.:||.||.|..|:::|:| .....:|..|.:|| ::.:.::||: .|.:|.:    
 Frog  1294 TQHPLPNTVKDFWRLVLDYHCTSIVML-NDVDPAQLCPQYWP-ENGVHRHGPI-QVEFVSA---- 1351

  Fly   541 NIKQWEFKINKKIVSLTEMMAGVKAPT---RTVQLFQLTCWPMGHKVPSSTNSLVYLMNMVEIWR 602
                   .:.:.|:|....:.....|.   |.||.||...|||....|.|..|.:.|:..|:.|:
 Frog  1352 -------DLEEDIISRIFRIYNASRPQDGYRMVQQFQFLGWPMYRDTPVSKRSFLKLIRQVDKWQ 1409

  Fly   603 NKVD--YGPVCVVSPDGRSRAGVYCAANACIEQVIQHGEVDVFQAVKTVRRHRPQLVENMTEYKY 665
            .:.:  .|...|...:|..|:|.:||.:...|.:.....||||.||||:|.::|.:|:.:.:||:
 Frog  1410 EEYNGGEGRTVVHCLNGGGRSGTFCAISIICEMLHHQRAVDVFHAVKTLRNNKPNMVDLLDQYKF 1474

  Fly   666 CYDLVLHYV 674
            ||::.|.|:
 Frog  1475 CYEVALEYL 1483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp36ENP_001286033.1 Y_phosphatase 125..368 CDD:395053 96/243 (40%)
Y_phosphatase 428..671 CDD:395053 78/247 (32%)
ptprmXP_031759627.1 MAM 23..183 CDD:214533
Ig strand A 174..180 CDD:409353
ig 193..275 CDD:395002
Ig strand A' 193..198 CDD:409353
Ig strand B 201..209 CDD:409353
Ig strand C 219..223 CDD:409353
Ig strand D 244..247 CDD:409353
Ig strand F 257..264 CDD:409353
Ig strand G 272..276 CDD:409353
FN3 283..362 CDD:214495
FN3 384..478 CDD:238020
fn3 481..574 CDD:394996
R-PTPc-M-1 918..1190 CDD:350481 105/285 (37%)
R-PTPc-M-2 1276..1481 CDD:350483 67/218 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000829
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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