DRSC/TRiP Functional Genomics Resources

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Protein Alignment JMJD4 and T07C4.12

DIOPT Version :10

Sequence 1:NP_609870.1 Gene:JMJD4 / 35089 FlyBaseID:FBgn0032671 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_001370219.1 Gene:T07C4.12 / 4363045 WormBaseID:WBGene00044891 Length:144 Species:Caenorhabditis elegans


Alignment Length:115 Identity:22/115 - (19%)
Similarity:44/115 - (38%) Gaps:35/115 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   321 NEISDCQQ-MDNFEAHCQTMLRASFGINYLDFIE-----------LLEFIAARRLAEGTVATK-- 371
            |:.:|.|: :.|...:.: :.:|...||..|||:           .||.|..::|||.....|  
 Worm    22 NDFADDQEDLKNIIRYGE-LFKACHAINSTDFIQKSEDLKDEEKVALERIVEQKLAESAKNEKDI 85

  Fly   372 -----FLLFDSYTM---------------NDYHVQYDLECLWKITRTLTE 401
                 .::.:||..               .|.:.::|::...:..:.|.:
 Worm    86 AWNVNIVVANSYVAKSLRPVINIQMPTVGGDTNFEFDIDSFAQFRQQLAQ 135

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JMJD4NP_609870.1 Cupin_8 39..299 CDD:463936
JmjC 199..299 CDD:396791
T07C4.12NP_001370219.1 COMM_domain 83..136 CDD:462125 6/53 (11%)
Blue background indicates that the domain is not in the aligned region.

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