DRSC/TRiP Functional Genomics Resources

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Protein Alignment JMJD4 and jmjd8

DIOPT Version :9

Sequence 1:NP_001286031.1 Gene:JMJD4 / 35089 FlyBaseID:FBgn0032671 Length:425 Species:Drosophila melanogaster
Sequence 2:XP_031749376.1 Gene:jmjd8 / 100498157 XenbaseID:XB-GENE-6070939 Length:268 Species:Xenopus tropicalis


Alignment Length:310 Identity:66/310 - (21%)
Similarity:107/310 - (34%) Gaps:94/310 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 PEEV--VETDP-------QLPEEIERC------SGLDYNDFFWRYMHKNIPVIIANVSNDWECQN 65
            ||:.  .|||.       ...:|.|||      :.|.|..|..:|.:|: |||:..:::      
 Frog    20 PEQTGYTETDGGWHLYHYSAAQEEERCTVERVDASLTYASFMQQYAYKS-PVILQGITD------ 77

  Fly    66 WTVGQSSPESRDLNSNPSASSINFDYLKTKISDGPVPVANCNSSYFNSHTKLELNFHDYLAKWRS 130
                  :.|.|.|.|.        ..|..:..:..|.::..|:   .|:.||::.|.:|:..:  
 Frog    78 ------NSEFRTLCSK--------QRLLQEYGERLVRLSTANT---YSYEKLDIPFREYVEHY-- 123

  Fly   131 SIESQSSAAWTSAEVNSNVAPASGDNLYLKDWHLAAQMPGYNFYKVPKYFASDWLNEQLIQQGKD 195
             :..|...|     :..:.....|||.: .:|       |..|.|                    
 Frog   124 -LRPQDMNA-----LGIDTLYFFGDNNF-TEW-------GALFEK-------------------- 154

  Fly   196 DYRFVYMGP--KNSWTS--YHADVFGS-----FSW-----STNIVGLKKWLIMPPGEELKLNDRL 246
                 |..|  |...||  |...:.||     |.|     |..|.|.|:|.:.||.:..:.|...
 Frog   155 -----YTPPPFKIPGTSGAYSFGIAGSGTGVPFHWHGPGYSEVIYGRKRWFLYPPDKTPEFNPNR 214

  Fly   247 GNLPFSIDEKMLDEHNVRYYTINQRANEAVFVPSGWFHQVWNLTDTISVN 296
            ..|.:.:|.........|......|..|.::.|..|:|...||..::.::
 Frog   215 TTLSWLLDTYPFLPEEDRPIECTIRPGEVLYFPDRWWHATLNLDTSVFIS 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JMJD4NP_001286031.1 JmjC 172..221 CDD:214721 11/57 (19%)
JmjC 199..299 CDD:202224 28/112 (25%)
jmjd8XP_031749376.1 cupin_RmlC-like 58..252 CDD:424065 52/258 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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