DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5783 and Glyat

DIOPT Version :9

Sequence 1:NP_609869.1 Gene:CG5783 / 35088 FlyBaseID:FBgn0032670 Length:287 Species:Drosophila melanogaster
Sequence 2:NP_001009648.1 Gene:Glyat / 293779 RGDID:1307163 Length:296 Species:Rattus norvegicus


Alignment Length:289 Identity:64/289 - (22%)
Similarity:107/289 - (37%) Gaps:70/289 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VIGLKDIQEFQQLYKQNWPKYCQE-------YYCLD-----NFVEFLKKQPHMRNIKMYTLDAKQ 59
            ::.|:..|..|.|.| :..||..|       .|.::     |....:.|.|....:  .....:|
  Rat     2 IVPLQGAQMLQMLEK-SLKKYLPESLKVYGTIYHVNHGNPFNLKALVDKWPDFNTV--VVRPQEQ 63

  Fly    60 ARDEGLFVIVDRYQLFVGCLNNTNGLVGKALDLLDWSSGLKCSSIPSRHIGALDSLVESKKLNLV 124
            ...:.|....:.||::.....|....:|.: ::::|...|:..|..|....|:.:|.....|.:.
  Rat    64 EMKDDLDFYTNTYQIYSKDPENCQEFLGSS-EVINWKQHLQIQSSQSHLNKAIQNLASIHSLQVK 127

  Fly   125 YRDCTNLFFMKANDALKL--------KVEPPSG---------FVLKSLSVADAPLVNAEWP-NHH 171
            :.:  |:.::.:....||        .:.|.||         |.|.||.|..|.|||..|. ..:
  Rat   128 HSE--NILYVVSETVRKLFPSLLDTKNLSPGSGKPKAINQEMFKLSSLDVTHAALVNKFWLFGGN 190

  Fly   172 EGSLFFVERQIR----LCVSVGLYQEDTQELVAWCI----------------RLQGGYLGALQVK 216
            |.|..|:||.|:    .||   |..|.|.  .:|.:                |.||.....:..:
  Rat   191 ERSQRFIERCIKNFPSSCV---LGPEGTP--ASWTLMDQTGEMRMGGTVPQYRAQGLVSFVIYSQ 250

  Fly   217 D-THKRRGF--------GSVVTREIAYRL 236
            | ..|:|||        .:.|.::::|.|
  Rat   251 DQIMKKRGFPVYSHTDKSNTVMQKMSYSL 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5783NP_609869.1 Gly_acyl_tr_N <91..183 CDD:283638 28/109 (26%)
FR47 187..272 CDD:117022 15/75 (20%)
GlyatNP_001009648.1 Gly_acyl_tr_N 1..206 CDD:399190 47/209 (22%)
Gly_acyl_tr_C 207..295 CDD:117021 17/78 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1221333at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.