DRSC/TRiP Functional Genomics Resources

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Protein Alignment Socs36E and socs4

DIOPT Version :10

Sequence 1:NP_523593.5 Gene:Socs36E / 35085 FlyBaseID:FBgn0041184 Length:737 Species:Drosophila melanogaster
Sequence 2:XP_021322920.1 Gene:socs4 / 797891 ZFINID:ZDB-GENE-070720-4 Length:423 Species:Danio rerio


Alignment Length:496 Identity:151/496 - (30%)
Similarity:217/496 - (43%) Gaps:135/496 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   168 SVGAAISTLQLHDNHGGNANCPLEADDDDDLDESLL--------RRRRSNSNSRSNIHHHHHHHQ 224
            ||.|.:|   ||...... :.||..::.|.|.|:|.        .|:..||::|.          
Zfish     6 SVDAELS---LHKLQAWK-HSPLFCENIDFLSEALFGKGPEAMSERKTKNSDTRP---------- 56

  Fly   225 QQQQQQHEAEVVEYCEVLESLPVSNMLSAGTQHSSKPVSRSNNSNSCCRSRSSKALSMGAATSSA 289
                                   .|:.|.......:.:.:        |||.|:..:........
Zfish    57 -----------------------KNLRSWSADSYIRSIKK--------RSRGSRHETAPRGEEGD 90

  Fly   290 SGSASTSVSTSTSSKRRCCKCKCRDAIRGLRDMLPSSSSSVSNKKDAAAVVAMVPRKSRTADRRS 354
            .....|:.|.|...:||...|.|         .:|..:.|.|..:.|.:                
Zfish    91 GADEQTARSASCPRRRRERMCSC---------TIPGETDSDSPCRKALS---------------- 130

  Fly   355 TPPTLGTSSGGSQRRMQSQRIRNSV--AVPDASHHHHQLIIRITSPGFVVESPNGGRVTV---VT 414
                         ||...|:.:::|  .:|..:||||......:|..|.|...:..::.|   :.
Zfish   131 -------------RRSLRQKFQDAVGQCLPLRNHHHHHHHPSGSSRPFSVLLWSKRKIHVSELME 182

  Fly   415 EPAPQSP------------------------QTPPRPRPLATVAPA-------GGAGHAGIG--- 445
            :..|.||                        :|.|:...|::..|.       |..|.:.:.   
Zfish   183 DKCPFSPKSELAQCWHLIKKHGTNTKPSLSIETEPKGPLLSSTPPTLLSWEQIGSTGASSLDDWD 247

  Fly   446 ---AARNMTVHSQIDFMHCLVPDLEKITNSSFYWGKMDRYEAEHLLEGKPEGTFLLRDSAQEEFL 507
               |..:....:..|::  |||||.:|.||..|||.:||:|||.||||:||||||||||||:|:|
Zfish   248 PSFALGDSQCCAHTDYI--LVPDLLQINNSPCYWGVLDRFEAEQLLEGQPEGTFLLRDSAQDEYL 310

  Fly   508 FSVTFRKYGRSLHARIEQSGHKFSFDCHDPCVFTAPTVTGLLEHYKDPACVMFFEPCLTIPLHRR 572
            |||:||:|.|||||||||:|.:||||..|||::...:|||||:||.||:..:||||.|:.||.|.
Zfish   311 FSVSFRRYSRSLHARIEQNGKRFSFDGRDPCMYRDSSVTGLLKHYSDPSTCLFFEPLLSRPLPRN 375

  Fly   573 QTFSLQQLSRATIVSNTSYDGINQMELPGRLKSYLKEYHYK 613
            ..||||.|.||.|.|.|:|.||..:.||..|:.:|::|||:
Zfish   376 FPFSLQHLCRAVICSCTTYQGIEALPLPYTLRHFLRQYHYR 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Socs36ENP_523593.5 SH2 463..563 CDD:472789 67/99 (68%)
SOCS 575..626 CDD:470605 20/39 (51%)
socs4XP_021322920.1 SOCS 100..150 CDD:432667 14/87 (16%)
SH2 266..366 CDD:472789 67/99 (68%)
SOCS 376..>416 CDD:470605 19/39 (49%)

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