DRSC/TRiP Functional Genomics Resources

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Protein Alignment Socs36E and socs4

DIOPT Version :9

Sequence 1:NP_523593.5 Gene:Socs36E / 35085 FlyBaseID:FBgn0041184 Length:737 Species:Drosophila melanogaster
Sequence 2:XP_021322920.1 Gene:socs4 / 797891 ZFINID:ZDB-GENE-070720-4 Length:423 Species:Danio rerio


Alignment Length:496 Identity:151/496 - (30%)
Similarity:217/496 - (43%) Gaps:135/496 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   168 SVGAAISTLQLHDNHGGNANCPLEADDDDDLDESLL--------RRRRSNSNSRSNIHHHHHHHQ 224
            ||.|.:|   ||...... :.||..::.|.|.|:|.        .|:..||::|.          
Zfish     6 SVDAELS---LHKLQAWK-HSPLFCENIDFLSEALFGKGPEAMSERKTKNSDTRP---------- 56

  Fly   225 QQQQQQHEAEVVEYCEVLESLPVSNMLSAGTQHSSKPVSRSNNSNSCCRSRSSKALSMGAATSSA 289
                                   .|:.|.......:.:.:        |||.|:..:........
Zfish    57 -----------------------KNLRSWSADSYIRSIKK--------RSRGSRHETAPRGEEGD 90

  Fly   290 SGSASTSVSTSTSSKRRCCKCKCRDAIRGLRDMLPSSSSSVSNKKDAAAVVAMVPRKSRTADRRS 354
            .....|:.|.|...:||...|.|         .:|..:.|.|..:.|.:                
Zfish    91 GADEQTARSASCPRRRRERMCSC---------TIPGETDSDSPCRKALS---------------- 130

  Fly   355 TPPTLGTSSGGSQRRMQSQRIRNSV--AVPDASHHHHQLIIRITSPGFVVESPNGGRVTV---VT 414
                         ||...|:.:::|  .:|..:||||......:|..|.|...:..::.|   :.
Zfish   131 -------------RRSLRQKFQDAVGQCLPLRNHHHHHHHPSGSSRPFSVLLWSKRKIHVSELME 182

  Fly   415 EPAPQSP------------------------QTPPRPRPLATVAPA-------GGAGHAGIG--- 445
            :..|.||                        :|.|:...|::..|.       |..|.:.:.   
Zfish   183 DKCPFSPKSELAQCWHLIKKHGTNTKPSLSIETEPKGPLLSSTPPTLLSWEQIGSTGASSLDDWD 247

  Fly   446 ---AARNMTVHSQIDFMHCLVPDLEKITNSSFYWGKMDRYEAEHLLEGKPEGTFLLRDSAQEEFL 507
               |..:....:..|::  |||||.:|.||..|||.:||:|||.||||:||||||||||||:|:|
Zfish   248 PSFALGDSQCCAHTDYI--LVPDLLQINNSPCYWGVLDRFEAEQLLEGQPEGTFLLRDSAQDEYL 310

  Fly   508 FSVTFRKYGRSLHARIEQSGHKFSFDCHDPCVFTAPTVTGLLEHYKDPACVMFFEPCLTIPLHRR 572
            |||:||:|.|||||||||:|.:||||..|||::...:|||||:||.||:..:||||.|:.||.|.
Zfish   311 FSVSFRRYSRSLHARIEQNGKRFSFDGRDPCMYRDSSVTGLLKHYSDPSTCLFFEPLLSRPLPRN 375

  Fly   573 QTFSLQQLSRATIVSNTSYDGINQMELPGRLKSYLKEYHYK 613
            ..||||.|.||.|.|.|:|.||..:.||..|:.:|::|||:
Zfish   376 FPFSLQHLCRAVICSCTTYQGIEALPLPYTLRHFLRQYHYR 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Socs36ENP_523593.5 SH2 463..563 CDD:301589 67/99 (68%)
SOCS 575..626 CDD:295349 20/39 (51%)
socs4XP_021322920.1 SOCS 101..150 CDD:315310 14/86 (16%)
SH2 266..366 CDD:326550 67/99 (68%)
SOCS 376..>416 CDD:321974 19/39 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170575807
Domainoid 1 1.000 43 1.000 Domainoid score I12381
eggNOG 1 0.900 - - E1_KOG4566
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002657
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10155
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
87.800

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