DRSC/TRiP Functional Genomics Resources

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Protein Alignment Socs36E and socs5a

DIOPT Version :10

Sequence 1:NP_523593.5 Gene:Socs36E / 35085 FlyBaseID:FBgn0041184 Length:737 Species:Drosophila melanogaster
Sequence 2:NP_001107230.1 Gene:socs5a / 768142 ZFINID:ZDB-GENE-061013-408 Length:528 Species:Danio rerio


Alignment Length:582 Identity:192/582 - (32%)
Similarity:255/582 - (43%) Gaps:137/582 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 VEQEEEQQRQ----C--ADGATDDDAAALSADSLNANGQIVNVTLEGGYGEVGVVTNRTAGSSPE 151
            ||...:.|.|    |  .|||..|       .:|:||....:|      ..:.:|..||:||   
Zfish    27 VETSPQHQPQTDTVCHSVDGAQGD-------ITLDANSPSSSV------AALPLVAWRTSGS--- 75

  Fly   152 AAKTERQPVNNNGLAGSVGAAISTLQLHDNHGGNANCP--LEADDDDDLDES---LLRRRRSNSN 211
                    |...|                 |...|:.|  ||...:.|.|::   |..||.|.| 
Zfish    76 --------VTRRG-----------------HNCVADVPQILEITVEQDADDARAPLGARRDSYS- 114

  Fly   212 SRSNIHHHHHHHQQQQQQQHEAEVVEYCEVLESLPVSNMLSAGTQHSSKPVSRSNNSNSCCRSRS 276
                     .|.....:::|..          |....:.|....:.|.:...|...|||.....|
Zfish   115 ---------RHAPWSGKKRHSC----------STKAQSSLETTDRRSGRSRRRHGTSNSPEELES 160

  Fly   277 SKALSMGAATSSASGSA----STSVSTSTSSKRRCCKCKCRDAIRGLRDMLPSSSSSVSNK---- 333
            ....|:........|..    |:|.:|.....:|  |.:..:.:.......|  .|.::.|    
Zfish   161 GTTRSIRQQIHDTVGLCLPLRSSSRNTHLPPPKR--KIQITELMLETCPFAP--GSDLARKWHLI 221

  Fly   334 KDAAAVVAMVPRKSRTADRRSTPPTLGTSSGGSQRRMQSQRIRNSVAV-------PDASHHHHQL 391
            |...|.:.::|..       |:|...|.:....:...:..|.|..:::       |||..|   .
Zfish   222 KQHTAPINVIPLD-------SSPDACGATCASPEDEEERLRERRRLSIEEGVDPPPDAQIH---T 276

  Fly   392 IIRITSP---------------GFVVESPNGG----------RVTVVTEPAPQSPQTPPRPRPLA 431
            :..||:|               |..|....|.          ..|.:...|.:..|.        
Zfish   277 VEAITAPLASLYKLGPKLAPGMGEAVGDSRGAAAANCDSEDDETTTLCLQARKPKQW-------- 333

  Fly   432 TVAPAGGAGHAGIGAARNMTVHSQIDFMHCLVPDLEKITNSSFYWGKMDRYEAEHLLEGKPEGTF 496
               .|.|.||..........||:|||::|||||||.:||....|||.|||||||.||:|:|||||
Zfish   334 ---QASGEGHPSSKQPGPWKVHTQIDYIHCLVPDLLQITALPCYWGVMDRYEAEALLDGRPEGTF 395

  Fly   497 LLRDSAQEEFLFSVTFRKYGRSLHARIEQSGHKFSFDCHDPCVFTAPTVTGLLEHYKDPACVMFF 561
            ||||||||::||||:||:|||||||||||..|.||||.||||||.|.|||.||||||||:..|||
Zfish   396 LLRDSAQEDYLFSVSFRRYGRSLHARIEQWNHNFSFDAHDPCVFHAATVTALLEHYKDPSACMFF 460

  Fly   562 EPCLTIPLHRRQTFSLQQLSRATIVSNTSYDGINQMELPGRLKSYLKEYHYKQKLRVKPIDQ 623
            ||.||:||||...|.||.|:||.|....:||||..:.||..|:.||:||||||::||:.:::
Zfish   461 EPLLTVPLHRTFPFGLQSLARAAICHGITYDGIGALPLPPALQDYLREYHYKQRVRVRWLER 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Socs36ENP_523593.5 SH2 463..563 CDD:472789 75/99 (76%)
SOCS 575..626 CDD:470605 24/49 (49%)
socs5aNP_001107230.1 SOCS 123..186 CDD:432667 13/72 (18%)
SH2 362..462 CDD:472789 75/99 (76%)
SOCS 471..526 CDD:470605 24/52 (46%)

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