DRSC/TRiP Functional Genomics Resources

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Protein Alignment Socs36E and Socs4

DIOPT Version :9

Sequence 1:NP_523593.5 Gene:Socs36E / 35085 FlyBaseID:FBgn0041184 Length:737 Species:Drosophila melanogaster
Sequence 2:NP_543119.2 Gene:Socs4 / 67296 MGIID:1914546 Length:436 Species:Mus musculus


Alignment Length:425 Identity:160/425 - (37%)
Similarity:216/425 - (50%) Gaps:83/425 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   258 SSKPVSRSNNSNSCCRSRSSKALSMGAATSSASGSASTSVSTSTSSKR-------------RCCK 309
            |.|.:|.|..|.||     |::.::|...:......|.....|.||..             |..|
Mouse    30 SGKKLSWSKKSESC-----SESEAIGTVENVEIPLRSQERQLSCSSIELDLDHSCGHRFLGRSLK 89

  Fly   310 CKCRDAIR---GLRDMLPSSSSSVSNKKDAAAVVAMV-----PRKSRTADR-----RSTPPTL-- 359
            .|.:||:.   .:::.....|..:.:|:.......|:     |.:|..|.|     |.|.|..  
Mouse    90 QKLQDAVGQCFPIKNCSGRHSPGLPSKRKIHISELMLDKCPFPPRSDLAFRWHFIKRHTVPMSPN 154

  Fly   360 ---GTSSGGSQRRMQSQRI--RNSV-AVPDASHHHHQLIIRITSPGFVVESPNGGRVT------- 411
               ..|:..|:|:::..::  ||:. .:|..||.:.|..: ||:..   .|..||.:|       
Mouse   155 SDEWVSADLSERKLRDAQLKRRNTEDDIPCFSHTNGQPCV-ITANS---ASCTGGHITGSMMNLV 215

  Fly   412 ---------------VVTEPAPQSPQTPPR----PRPLATVAPAGGAGHAGIGAARNMTVHSQID 457
                           ::|.......:..||    ...|...||.              ..|:|||
Mouse   216 TNNSIEDSDMDSEDEIITLCTSSRKRNKPRWEMEEEILQLEAPP--------------KFHTQID 266

  Fly   458 FMHCLVPDLEKITNSSFYWGKMDRYEAEHLLEGKPEGTFLLRDSAQEEFLFSVTFRKYGRSLHAR 522
            ::|||||||.:|:|:..|||.||:|.||.||||||||||||||||||::||||:||:|.||||||
Mouse   267 YVHCLVPDLLQISNNPCYWGVMDKYAAEALLEGKPEGTFLLRDSAQEDYLFSVSFRRYSRSLHAR 331

  Fly   523 IEQSGHKFSFDCHDPCVFTAPTVTGLLEHYKDPACVMFFEPCLTIPLHRRQTFSLQQLSRATIVS 587
            |||..|.||||.||||||.:|.:||||||||||:..|||||.|:.||.|...||||.:.|..|.:
Mouse   332 IEQWNHNFSFDAHDPCVFHSPDITGLLEHYKDPSACMFFEPLLSTPLIRTFPFSLQHICRTVICN 396

  Fly   588 NTSYDGINQMELPGRLKSYLKEYHYKQKLRVKPID 622
            .|:||||:.:.:|..:|.||||||||.|:|:..||
Mouse   397 CTTYDGIDALPIPSPMKLYLKEYHYKSKVRLLRID 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Socs36ENP_523593.5 SH2 463..563 CDD:301589 73/99 (74%)
SOCS 575..626 CDD:295349 25/48 (52%)
Socs4NP_543119.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..25
SOCS 58..106 CDD:289383 9/47 (19%)
SH2_SOCS4 272..372 CDD:198248 73/99 (74%)
SOCS_SOCS4 381..436 CDD:239707 25/51 (49%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167833081
Domainoid 1 1.000 97 1.000 Domainoid score I7243
eggNOG 1 0.900 - - E1_KOG4566
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002657
OrthoInspector 1 1.000 - - otm44029
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10155
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5478
SonicParanoid 1 1.000 - - X2417
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.830

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