DRSC/TRiP Functional Genomics Resources

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Protein Alignment Socs36E and socs5b

DIOPT Version :9

Sequence 1:NP_523593.5 Gene:Socs36E / 35085 FlyBaseID:FBgn0041184 Length:737 Species:Drosophila melanogaster
Sequence 2:XP_005156658.1 Gene:socs5b / 559639 ZFINID:ZDB-GENE-080722-18 Length:598 Species:Danio rerio


Alignment Length:631 Identity:191/631 - (30%)
Similarity:281/631 - (44%) Gaps:141/631 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 LDEEELQVEEILTEATVSAATSPAEVRQIIIKIQLAKMENGNPVAAG---------QVESFAEV- 92
            |..::|.....:.:....|...|.|.|.......|:.:    |:|.|         .:....|: 
Zfish    63 LCSQDLDCAHCVLDLDRGAHAEPYETRSSTPSRNLSPL----PLATGGRRSHNCVADIPQIVEIS 123

  Fly    93 VEQEEEQQRQCA-------------DGATDDDAAALSADSLNANGQIVNVTLEGGYGEVGVVTNR 144
            :::|.|..|:..             .|......:..:..||.|:.:                |.|
Zfish   124 IDKESEDARRGPLVRRDSYSRHAPWGGKKKHSCSTKTQSSLEADRR----------------TGR 172

  Fly   145 TAGSSPEAAKTER-------QPVNNNGLAGSVGAAISTLQLHDNHGGNANCPLEADDDDDLDESL 202
            :.||:   |:.||       |.:|::...||.|.::|:..|..          ...|...|...|
Zfish   173 SRGST---ARRERRYAVSSIQEINDSVEVGSSGRSLSSRSLRQ----------RLRDTVGLCLPL 224

  Fly   203 LRRRRSNSNSRSNIHHHHHHHQQQQQQQHEAE-VVEYCEVLESLPVSNMLSAGTQHSSKPVSRSN 266
            ...|||.| ::..:        ..:::.|..| ::|.|.......::|......||:: |||..:
Zfish   225 PTHRRSQS-AKGQV--------SSKRKIHLTELMLETCPFPPGSDLANKWHLIKQHTA-PVSPHS 279

  Fly   267 NSNSCCRSRSSKALSMGAATSSASGSASTSVSTSTSSKRRCCKCKCRDAIRGLRDMLPSS---SS 328
            :|                |...|..||.:|........|...:....:.:    |..|::   :.
Zfish   280 SS----------------ALFDAFDSAHSSPEDEEERLRERRRLSIEEGV----DPPPNAQIHTL 324

  Fly   329 SVSNKKDAAAVVA--MVPRKSRTADRRSTPPTLGTSSGGSQRRMQSQRIRNSVAVP------DAS 385
            ..::|..:...:.  |.|....|.....:..|:.:.|||...  .:.::..|:|||      |:.
Zfish   325 EATSKSSSLYKLGPKMAPGVGETLGEGRSLGTVSSISGGLSG--IAAQVPTSMAVPSHTVDCDSE 387

  Fly   386 HHHHQLIIRITSPGFVVESPNGGRVTVVTEPAPQSPQTPPRPRPLATVAPAGGAGHAGIGAARNM 450
            .....|.::...|   .:....|......:|.|                               .
Zfish   388 EDSTTLCLQTRRP---KQRHASGDTHCSRQPGP-------------------------------W 418

  Fly   451 TVHSQIDFMHCLVPDLEKITNSSFYWGKMDRYEAEHLLEGKPEGTFLLRDSAQEEFLFSVTFRKY 515
            .||:|||::|||||||:.||....|||.||||:||.||:|:|||||||||||||::||||:||:|
Zfish   419 KVHTQIDYIHCLVPDLQAITALPCYWGVMDRYQAEALLDGRPEGTFLLRDSAQEDYLFSVSFRRY 483

  Fly   516 GRSLHARIEQSGHKFSFDCHDPCVFTAPTVTGLLEHYKDPACVMFFEPCLTIPLHRRQTFSLQQL 580
            .|||||||||..|.||||.||||||.:.||||||||||||:..|||||.||.||||...||||.|
Zfish   484 NRSLHARIEQWNHNFSFDAHDPCVFHSSTVTGLLEHYKDPSACMFFEPLLTAPLHRTFPFSLQHL 548

  Fly   581 SRATIVSNTSYDGINQMELPGRLKSYLKEYHYKQKLRVKPIDQNTP 626
            :|::|..:|:||||..:.||..::.:|||||||||:||:.:::..|
Zfish   549 ARSSICRHTTYDGIGALPLPPTMQDFLKEYHYKQKVRVRWLEREPP 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Socs36ENP_523593.5 SH2 463..563 CDD:301589 73/99 (74%)
SOCS 575..626 CDD:295349 25/50 (50%)
socs5bXP_005156658.1 SOCS 174..228 CDD:289383 15/66 (23%)
SH2 431..531 CDD:301589 73/99 (74%)
SOCS_SOCS5 540..596 CDD:239708 26/55 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170575793
Domainoid 1 1.000 99 1.000 Domainoid score I7025
eggNOG 1 0.900 - - E1_KOG4566
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002657
OrthoInspector 1 1.000 - - otm24619
orthoMCL 1 0.900 - - OOG6_109258
Panther 1 1.100 - - LDO PTHR10155
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2417
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
109.740

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