DRSC/TRiP Functional Genomics Resources

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Protein Alignment Socs36E and Socs5

DIOPT Version :9

Sequence 1:NP_523593.5 Gene:Socs36E / 35085 FlyBaseID:FBgn0041184 Length:737 Species:Drosophila melanogaster
Sequence 2:NP_001102744.1 Gene:Socs5 / 500616 RGDID:1564914 Length:536 Species:Rattus norvegicus


Alignment Length:560 Identity:186/560 - (33%)
Similarity:252/560 - (45%) Gaps:119/560 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 EGGYGEVGV---------VTNRTAGSSPEAAKTERQPVNNNGLAGSVGAAISTLQLHDNHGGNAN 187
            |||.....|         |..::......|.:.:..|:..| :|..:|.:.|......|....|.
  Rat    22 EGGSRSENVDMNANRCLSVKEKSVSLGEAAPRQQSSPLREN-IALQLGLSPSKTFSRRNQNCAAE 85

  Fly   188 CP--LEADDDDDLDESL---LRRRRSNSNSRSNIHHHHHHHQQQQQQQHEAEVVEYCEVLESLPV 247
            .|  :|...:.|.|.|.   .|..|.:|.||        |.....:::|..              
  Rat    86 IPQVVEISIEKDSDSSATPGTRLARRDSYSR--------HAPWGGKKKHSC-------------- 128

  Fly   248 SNMLSAGTQHSSKPVSRSNNSNSCCRSRS-----SKALSMGAATSSASGSASTSVSTSTSSKRRC 307
                |..||.|.....:...:.|..:.|.     |....|.:.:|.|.||             |.
  Rat   129 ----STKTQSSLDTEKKFGRTRSGLQRRERRYGVSSMHDMDSVSSRAVGS-------------RS 176

  Fly   308 CKCKCRDAIRGL----RDMLPSSSSSVSNKK------------------DAAAVVAMVPRKSRTA 350
            .:.:.:|.: ||    |.....|....|||:                  |.|....::.:.:...
  Rat   177 LRQRLQDTV-GLCFPMRTYSKQSKPLFSNKRKIHLSELMLEKCPFPAGSDLAQKWHLIKQHTAPV 240

  Fly   351 DRRST-----PPTLGTSSGGSQRRMQSQRIRNSVAV---PDASHHHHQLIIRIT---------SP 398
            ...||     .|:|.::.....|..:.:|:.....|   |:|..|..:...::.         :|
  Rat   241 SPHSTFFDTFDPSLVSTEDEEDRLRERRRLSIEEGVDPPPNAQIHTFEATAQVNPLYKLGPKLAP 305

  Fly   399 GFVVESPNGGRVTVVTEPAPQSPQTPPRPRPLATV----------APAGGAGHAGIGAARNMTVH 453
            |....|.:|..:          |||.......:|.          ....|..|:.|.......||
  Rat   306 GMTEISGDGSAI----------PQTNCDSEEDSTTLCLQSRRQKQRQVSGDSHSHISRQGAWKVH 360

  Fly   454 SQIDFMHCLVPDLEKITNSSFYWGKMDRYEAEHLLEGKPEGTFLLRDSAQEEFLFSVTFRKYGRS 518
            :|||::|||||||.:||.:..|||.|||||||.||||||||||||||||||::||||:||:|.||
  Rat   361 TQIDYIHCLVPDLLQITGNPCYWGVMDRYEAEALLEGKPEGTFLLRDSAQEDYLFSVSFRRYNRS 425

  Fly   519 LHARIEQSGHKFSFDCHDPCVFTAPTVTGLLEHYKDPACVMFFEPCLTIPLHRRQTFSLQQLSRA 583
            |||||||..|.||||.||||||.:.||||||||||||:..|||||.|||.|:|...||||.:.||
  Rat   426 LHARIEQWNHNFSFDAHDPCVFHSSTVTGLLEHYKDPSSCMFFEPLLTISLNRTFPFSLQYICRA 490

  Fly   584 TIVSNTSYDGINQMELPGRLKSYLKEYHYKQKLRVKPIDQ 623
            .|...|:||||:.:.||..|:.:|||||||||:||:.:::
  Rat   491 VICRCTTYDGIDGLPLPSMLQDFLKEYHYKQKVRVRWLER 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Socs36ENP_523593.5 SH2 463..563 CDD:301589 76/99 (77%)
SOCS 575..626 CDD:295349 26/49 (53%)
Socs5NP_001102744.1 SOCS 146..195 CDD:289383 13/62 (21%)
SH2 370..470 CDD:301589 76/99 (77%)
SOCS_SOCS5 479..534 CDD:239708 26/52 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166336657
Domainoid 1 1.000 97 1.000 Domainoid score I7083
eggNOG 1 0.900 - - E1_KOG4566
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002657
OrthoInspector 1 1.000 - - otm46119
orthoMCL 1 0.900 - - OOG6_109258
Panther 1 1.100 - - LDO PTHR10155
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2417
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1110.700

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