DRSC/TRiP Functional Genomics Resources

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Protein Alignment Socs36E and Socs44A

DIOPT Version :9

Sequence 1:NP_523593.5 Gene:Socs36E / 35085 FlyBaseID:FBgn0041184 Length:737 Species:Drosophila melanogaster
Sequence 2:NP_523659.1 Gene:Socs44A / 35786 FlyBaseID:FBgn0033266 Length:342 Species:Drosophila melanogaster


Alignment Length:416 Identity:90/416 - (21%)
Similarity:142/416 - (34%) Gaps:116/416 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   222 HHQQQQQQQHEAEVVEYCEVLESLPVSNMLSAGTQHSSKPVSRSNNSNSCCRSRSSKALSMGAAT 286
            |..|.|.|..:.              |..|:.|   ...|..|.........|.:.:..|..|..
  Fly     3 HGDQSQNQSSQR--------------SQALTGG---GDSPRDREKEKKGWFHSLTRRKKSDSALA 50

  Fly   287 SSASGSASTSVSTSTSSKRRCCKCKCRDAIRGLRDMLPSSSSSVSNKKDAAAVVAMVPRKSRTAD 351
            .:||.:.|||.|.:.:::  .|..:..|          ||.:|.||.......:    |:.|..|
  Fly    51 VTASAAVSTSGSQNNNNE--VCVLEAAD----------SSMASCSNGGTGTGTL----RRRRDKD 99

  Fly   352 RRSTPPTLGTSSGGSQRRMQSQ---RIRNSVAVPDASHHHHQLIIRITSPGFVVESPNGGRVTVV 413
            :|:....|        ||...|   .:||..::.|..                    :||.....
  Fly   100 KRNVFARL--------RRKVGQGLSSLRNWHSMGDCD--------------------DGGTTDAT 136

  Fly   414 TE-------PAPQSPQTPPRPRPLATVAPAGGAGHAGIGAARNM-----TVHS--QIDFMHCLVP 464
            .|       |.|..|.|                 |..:...|..     ..||  ||.:..|   
  Fly   137 YEFLTPAICPEPTLPFT-----------------HDYLRFIRKKWLEREDAHSPNQIMYKAC--- 181

  Fly   465 DLEKITNSSFYWGKMDRYEAEHLLEGKPEGTFLLRDSAQEEFLFSVTFRKYGRSLHARIEQSGHK 529
              .::.|..:|||::.|.:::..|..||.|:||:|||......|:::||....:||.|:|...:.
  Fly   182 --SEMLNQVWYWGEISRRDSQRQLSDKPTGSFLVRDSETSGSQFTLSFRIVNVTLHYRLEYRDNF 244

  Fly   530 FSFD--CHDPCVFTAPTVTGLLEHYKDPACVMF----------FEPCLTIPLHRRQTF-SLQQLS 581
            :.|:  .::..|   ..:..:|....:...|.|          |...|..||.|.... .||.|.
  Fly   245 WHFEELKYESIV---EMIEDILHRCTNDNFVCFVKVPNEMQPPFPVILKYPLSRYSNMPKLQDLC 306

  Fly   582 RATIVSNTSYDGINQMELPGRLKSYL 607
            |..:....|.:.:.|:.:|.::..||
  Fly   307 RRVLQRQMSREQLAQLPVPAQMLEYL 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Socs36ENP_523593.5 SH2 463..563 CDD:301589 27/111 (24%)
SOCS 575..626 CDD:295349 9/34 (26%)
Socs44ANP_523659.1 SH2_SOCS_family 188..266 CDD:198178 23/80 (29%)
SOCS 293..333 CDD:295349 11/40 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45459126
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4566
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D460176at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10155
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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