DRSC/TRiP Functional Genomics Resources

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Protein Alignment Socs36E and socs6b

DIOPT Version :10

Sequence 1:NP_523593.5 Gene:Socs36E / 35085 FlyBaseID:FBgn0041184 Length:737 Species:Drosophila melanogaster
Sequence 2:NP_955919.1 Gene:socs6b / 322950 ZFINID:ZDB-GENE-030131-1670 Length:532 Species:Danio rerio


Alignment Length:589 Identity:139/589 - (23%)
Similarity:208/589 - (35%) Gaps:171/589 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 DDAAALSADSLNANGQIVNVTLEGGYGEVGVVTNRTAGSSPEAAKTERQPVNNNGLAGSVGAAIS 174
            |.||:.||:.          :|.||.....:|::.......:.:|...:   :.||.|::...:|
Zfish    29 DLAASFSAED----------SLFGGCYSKDLVSSDLDNEDEKRSKVRSK---SEGLMGTLKRRLS 80

  Fly   175 TLQLHDNHGGNAN-CPLEADDDDDLDES----LLRRRRSNSNSRSNIHHHHHHHQQQQQQQHEAE 234
            ..|.....||:.: |.:   |||....|    .|...:|..:|||...|.||:            
Zfish    81 AKQKPKVKGGSPSVCSI---DDDTFSSSSAPISLSDLKSQRSSRSTSVHSHHY------------ 130

  Fly   235 VVEYCEVLESLPVSNMLSAGTQHSSKPVSRSNNSNSCCRSRSSKALSMGAATSSA---------- 289
                              :.|....:||    ||...|.....|||...:..||.          
Zfish   131 ------------------SPTPWPLRPV----NSEETCIKMDVKALMNSSDPSSTLNSVHQDFLD 173

  Fly   290 ----SGSASTSVSTSTSSKRRCCKCKCRD----------AIRGLR-------------DMLPSSS 327
                .|.:|.|...:|.........:..|          .:.||.             .:.|...
Zfish   174 LQREFGESSDSFRITTRVPDHHSATQNGDLHLDMDEHVPVVLGLAAQDYIQYTMPLDDGLYPDDE 238

  Fly   328 SSVSNKKDAAAVVAMVPRKSRTADRRSTPPTLGTSSGGSQRRMQSQRIRNSVAVPD---ASHHHH 389
            .|.|...||...:.:||:                |.|........:.|...:..||   .|...:
Zfish   239 GSRSFCLDATTPMDIVPQ----------------SEGCGSLHQDEEPIDQDLLSPDIFMESSSVN 287

  Fly   390 QLIIRITSPGFVVESPNGGRVTVVTEPAPQSPQTPPRPRPLATVAPAGGAG-HAGIGAARNMTVH 453
            ||.:...:...     .|.|:     .||.||..||.|......:.:|.|| ||.:  |..:..|
Zfish   288 QLFLNTANVLL-----QGSRL-----EAPLSPLLPPLPDSYLQRSFSGFAGTHAQV--AERVMHH 340

  Fly   454 SQID--------------------FMHCLVPDLEKITNSSFYWGKMDRYEAEHLLEGKPEGTFLL 498
            ...|                    .:..|..:|:|:....:|||.:.|:|||..|...|:|:||:
Zfish   341 LNFDPNSAPGVQRVYDAVQNSGPMVVTSLTAELKKLAKQGWYWGPITRWEAEEKLTNLPDGSFLV 405

  Fly   499 RDSAQEEFLFSVTFRKYGRSLHARIEQSGHKFSFDCHDPCVFTAPTVTG------LLEH-YKDPA 556
            |||:.:.:|.|::||...::||.|||.|...|||       :..|.:.|      |::: .||..
Zfish   406 RDSSDDRYLLSLSFRSQTKTLHTRIEHSNGSFSF-------YEQPDIEGHVSIVDLIDNSVKDSE 463

  Fly   557 CVMF------------FEPCLTIPLHR-RQTFSLQQLSRATIVSNTSYDGINQMELPGRLKSYLK 608
            ...|            :...||.|:.| .|..|||.|.|..|...|..|.|.::.||.::|.||:
Zfish   464 NGAFCYSRSRLPGSATYPVRLTNPVSRFMQVRSLQYLCRFVIRQYTRIDLIQKLPLPNKMKDYLQ 528

  Fly   609 EYHY 612
            |.||
Zfish   529 EKHY 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Socs36ENP_523593.5 SH2 463..563 CDD:472789 36/118 (31%)
SOCS 575..626 CDD:470605 17/38 (45%)
socs6bNP_955919.1 SH2_SOCS6 370..469 CDD:198250 36/105 (34%)
SOCS_SOCS6 492..532 CDD:239709 16/39 (41%)

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