DRSC/TRiP Functional Genomics Resources

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Protein Alignment Socs36E and Socs4

DIOPT Version :10

Sequence 1:NP_523593.5 Gene:Socs36E / 35085 FlyBaseID:FBgn0041184 Length:737 Species:Drosophila melanogaster
Sequence 2:NP_001100726.1 Gene:Socs4 / 305828 RGDID:1306503 Length:436 Species:Rattus norvegicus


Alignment Length:431 Identity:161/431 - (37%)
Similarity:209/431 - (48%) Gaps:87/431 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   258 SSKPVSRSNNSNSCCRSRSSKAL--------SMGAATSSASGSASTSVSTSTSSKRRCCKCKCRD 314
            |.|.:|.|..|.||..|.:...|        |.....|.:|.......|.......|..|.|.:|
  Rat    30 SGKKLSWSRKSESCSESEAVGTLESVEIPLRSQERELSCSSIELDLDHSCGHRFLGRSLKQKLQD 94

  Fly   315 AIR---GLRDMLPSSSSSVSNKKDAAAVVAMVPRKSRTADRRSTPP--------------TLGTS 362
            |:.   .:|:.....|..:.:|:.......|:       |:...||              |:..|
  Rat    95 AVGQCFPIRNCGARHSPGLPSKRTIHISELML-------DKCPFPPPSDLAFRWHFIKRHTVALS 152

  Fly   363 SGGSQ-----------RRMQSQRIRNSVAVPDASHHHHQLIIRITSPGFVVESPNGGRVT----- 411
            |...:           |..|.:|......:|..||...|..:..|:..    |..||.||     
  Rat   153 SSSDEWVSTDLCERRPRDAQLKRRSTEDDIPCFSHTSVQPCVITTNSA----SCAGGHVTGSLMN 213

  Fly   412 VVTEPAPQ---------------SPQTPPRPR------PLATVAPAGGAGHAGIGAARNMTVHSQ 455
            :||:.:.:               |.:...:||      .|...||.              ..|:|
  Rat   214 LVTDNSMEDGDMDSEDEIITLCTSSRKRNKPRWETDDGILQLEAPP--------------KFHTQ 264

  Fly   456 IDFMHCLVPDLEKITNSSFYWGKMDRYEAEHLLEGKPEGTFLLRDSAQEEFLFSVTFRKYGRSLH 520
            ||::|||||||.:|:|:..|||.||:|.||.||||||||||||||||||::||||:||:|.||||
  Rat   265 IDYVHCLVPDLLQISNNPCYWGVMDKYAAEALLEGKPEGTFLLRDSAQEDYLFSVSFRRYSRSLH 329

  Fly   521 ARIEQSGHKFSFDCHDPCVFTAPTVTGLLEHYKDPACVMFFEPCLTIPLHRRQTFSLQQLSRATI 585
            |||||..|.||||.||||||.:|.:||||||||||:..|||||.|:.||.|...||||.:.|..|
  Rat   330 ARIEQWNHNFSFDAHDPCVFHSPDITGLLEHYKDPSACMFFEPLLSTPLIRTFPFSLQHICRTVI 394

  Fly   586 VSNTSYDGINQMELPGRLKSYLKEYHYKQKLRVKPIDQNTP 626
            .:.|:||||:.:.:|..:|.||||||||.|:|:..||...|
  Rat   395 CNCTTYDGIDALPIPSPMKLYLKEYHYKSKVRLLRIDVPEP 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Socs36ENP_523593.5 SH2 463..563 CDD:472789 73/99 (74%)
SOCS 575..626 CDD:470605 25/50 (50%)
Socs4NP_001100726.1 SOCS 55..105 CDD:432667 10/49 (20%)
SH2_SOCS4 272..372 CDD:198248 73/99 (74%)
SOCS 381..436 CDD:470605 26/55 (47%)

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