DRSC/TRiP Functional Genomics Resources

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Protein Alignment Socs36E and Tnp2

DIOPT Version :9

Sequence 1:NP_523593.5 Gene:Socs36E / 35085 FlyBaseID:FBgn0041184 Length:737 Species:Drosophila melanogaster
Sequence 2:NP_058753.2 Gene:Tnp2 / 24840 RGDID:3885 Length:114 Species:Rattus norvegicus


Alignment Length:131 Identity:39/131 - (29%)
Similarity:50/131 - (38%) Gaps:43/131 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   242 LESLPVSNMLSAGTQH-----SSKPVSRSNNSNSC---CRS-------RSSKALSMGAATSSASG 291
            ::|||        |.|     ||:|.|.:||..:|   |||       .||.:.|.|..|.....
  Rat     5 MQSLP--------TTHPHPHSSSRPQSHTNNQCACSHHCRSCSQAGHPSSSSSPSSGPPTKHPKT 61

  Fly   292 SASTSVSTSTSSKRRCCKCKCRDAIRGLRDMLPSSSSSVSNKKDAAAVVAMVPRKSRT--ADRRS 354
            ...:..|.|..|.|..|. |.|..:.|          .||.:|       .|.|:.||  |.|||
  Rat    62 PMHSRYSPSRPSHRGSCP-KNRKTLEG----------KVSKRK-------AVRRRKRTHRAKRRS 108

  Fly   355 T 355
            :
  Rat   109 S 109

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Socs36ENP_523593.5 SH2 463..563 CDD:301589
SOCS 575..626 CDD:295349
Tnp2NP_058753.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..114 39/131 (30%)
TP2 1..110 CDD:279579 39/131 (30%)
Nuclear localization signal. /evidence=ECO:0000269|PubMed:10961985 87..95 4/24 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4566
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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