DRSC/TRiP Functional Genomics Resources

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Protein Alignment Socs36E and Tnp2

DIOPT Version :10

Sequence 1:NP_523593.5 Gene:Socs36E / 35085 FlyBaseID:FBgn0041184 Length:737 Species:Drosophila melanogaster
Sequence 2:NP_058753.2 Gene:Tnp2 / 24840 RGDID:3885 Length:114 Species:Rattus norvegicus


Alignment Length:131 Identity:39/131 - (29%)
Similarity:50/131 - (38%) Gaps:43/131 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   242 LESLPVSNMLSAGTQH-----SSKPVSRSNNSNSC---CRS-------RSSKALSMGAATSSASG 291
            ::|||        |.|     ||:|.|.:||..:|   |||       .||.:.|.|..|.....
  Rat     5 MQSLP--------TTHPHPHSSSRPQSHTNNQCACSHHCRSCSQAGHPSSSSSPSSGPPTKHPKT 61

  Fly   292 SASTSVSTSTSSKRRCCKCKCRDAIRGLRDMLPSSSSSVSNKKDAAAVVAMVPRKSRT--ADRRS 354
            ...:..|.|..|.|..|. |.|..:.|          .||.:|       .|.|:.||  |.|||
  Rat    62 PMHSRYSPSRPSHRGSCP-KNRKTLEG----------KVSKRK-------AVRRRKRTHRAKRRS 108

  Fly   355 T 355
            :
  Rat   109 S 109

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Socs36ENP_523593.5 SH2 463..563 CDD:472789
SOCS 575..626 CDD:470605
Tnp2NP_058753.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..114 39/131 (30%)
TP2 1..110 CDD:426159 39/131 (30%)
Nuclear localization signal. /evidence=ECO:0000269|PubMed:10961985, ECO:0000269|PubMed:17682055 87..95 4/24 (17%)
Blue background indicates that the domain is not in the aligned region.

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