DRSC/TRiP Functional Genomics Resources

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Protein Alignment Socs36E and Socs7

DIOPT Version :9

Sequence 1:NP_523593.5 Gene:Socs36E / 35085 FlyBaseID:FBgn0041184 Length:737 Species:Drosophila melanogaster
Sequence 2:NP_619598.2 Gene:Socs7 / 192157 MGIID:2651588 Length:648 Species:Mus musculus


Alignment Length:460 Identity:107/460 - (23%)
Similarity:163/460 - (35%) Gaps:130/460 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   242 LESLPVSNMLSAGTQHSSKP-------------------------VSRSNNSNSC---------C 272
            |:.|.....||.|.|...:|                         :||...:.||         .
Mouse   236 LQDLVPPGRLSRGEQQQQQPPPPPPPPGPLRPLAGPSRKGSFKIRLSRLFRTKSCNGGSGGGDGT 300

  Fly   273 RSRSSKALSMGAAT-SSASGSASTSVSTSTSSKRRCCKCKCRDAIRGLRDMLPSSSSSVSNKKDA 336
            ..|.|..|:..||: :...|||...:.|....:          ..|......|.|.|.:...:..
Mouse   301 GKRPSGDLAASAASLTDMGGSAVRELDTGRKPR----------LTRTQSAFSPVSFSPLFTGETV 355

  Fly   337 AAVVAMVPRKSRTADRRSTPPTLGTSSGGSQRRMQSQRIRNSVAVPDASHHHHQLIIRITSPGFV 401
            :.|...:.::..|:....|||               ...|.|:::.|.        |..|.|..|
Mouse   356 SLVDVDISQRGLTSPHPPTPP---------------PPPRRSLSLLDD--------ISGTLPTSV 397

  Fly   402 VESPNGGRVTVVTEPAPQSPQTP---PRPRPLATVAPAGGAGHAGIGAARNMTVHSQ-IDFMHCL 462
            :.:|.|..:.....|.|..|..|   ||..|:..                :.::||| ...:.|.
Mouse   398 LVAPMGSSLQSFPLPPPPPPHAPDAFPRIAPIRA----------------SESLHSQPPQHLQCP 446

  Fly   463 V--PD-------LEKITNSSFYWGKMDRYEAEHLLEGKPEGTFLLRDSAQEEFLFSVTFRKYGRS 518
            :  ||       |.::....:|||.|:..:||..|:|||:|:||:|||:...::.|::||..|.:
Mouse   447 LYRPDSSSFAASLRELEKCGWYWGPMNWEDAEMKLKGKPDGSFLVRDSSDPRYILSLSFRSQGIT 511

  Fly   519 LHARIEQSGHKFSFDCH----DPCVFTAPTVTGLLEHYKDPACVMFFE---------PC-LTIPL 569
            .|.|:|.....||..||    |.|......:...:.|.|:...:.|..         |. |..|:
Mouse   512 HHTRMEHYRGTFSLWCHPKFEDRCQSVVEFIKRAIMHSKNGKFLYFLRSRVPGLPPTPVQLLYPV 576

  Fly   570 HR-RQTFSLQQLSRATIVSNTSYDGINQMELPGRLKSYLKEYHY------------------KQK 615
            .| ....|||.|.|..|......|.|..:.||..|.||:::::|                  |||
Mouse   577 SRFSNVKSLQHLCRFRIRQLVRIDHIPDLPLPKPLISYIRKFYYYDPQEEVYLSLKEAQLISKQK 641

  Fly   616 LRVKP 620
            ..|:|
Mouse   642 QEVEP 646

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Socs36ENP_523593.5 SH2 463..563 CDD:301589 35/121 (29%)
SOCS 575..626 CDD:295349 19/64 (30%)
Socs7NP_619598.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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