DRSC/TRiP Functional Genomics Resources

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Protein Alignment Socs36E and cish

DIOPT Version :9

Sequence 1:NP_523593.5 Gene:Socs36E / 35085 FlyBaseID:FBgn0041184 Length:737 Species:Drosophila melanogaster
Sequence 2:XP_012816010.1 Gene:cish / 100135018 XenbaseID:XB-GENE-490099 Length:266 Species:Xenopus tropicalis


Alignment Length:277 Identity:73/277 - (26%)
Similarity:114/277 - (41%) Gaps:55/277 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   365 GSQRRMQSQRIR---NSVAVPDASHHHHQLIIRITSPGFVVESPNGGRVTVVTEPAPQSPQTPPR 426
            |:|..:..||:.   :.|..|..|  ..|::..:.||.....:||...|...||.:..:||...|
 Frog    16 GTQSLLAEQRVSRPCSCVGAPGFS--ADQVMHPLNSPACTRPAPNPVEVPTSTEDSVTNPQPQSR 78

  Fly   427 PRPLATVAPAGGAGHAGIGAARNMTVHSQIDFMHCLVPDLEKITNSSFYWGKMDRYEAEHLLEGK 491
            .|                        ..:.|.: |:......:..|.:|||.:...||:..|:..
 Frog    79 SR------------------------DPEADLL-CIARTFCYLRESGWYWGSITATEAKQQLQKM 118

  Fly   492 PEGTFLLRDSAQEEFLFSVTFRKYGRSLHARIEQSGHKFSFDCH---DPCVFTAPTVTGLLEHY- 552
            |||.||:|||....:||:::.|......:.|||.|...|..|.:   .|.:.:.|.|..|:::| 
 Frog   119 PEGFFLVRDSTHPSYLFTLSVRTNRGPTNVRIEYSDGLFRLDSNCLSKPRILSFPDVVSLVQYYV 183

  Fly   553 --------KDPAC------VMFFEPC-----LTIPLHR-RQTFSLQQLSRATIVSNTSYDG-INQ 596
                    |:|||      ....||.     |..||.| .|..|||.|.|..|..:.:.:. :.:
 Frog   184 SFCHSDVNKEPACQTPPVPPSPKEPAAVHLKLLHPLPRGAQCPSLQHLCRLQINRSLAPNAELTE 248

  Fly   597 MELPGRLKSYLKEYHYK 613
            :.||.|:..||:.|.::
 Frog   249 LPLPRRMVEYLQRYPFR 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Socs36ENP_523593.5 SH2 463..563 CDD:301589 33/117 (28%)
SOCS 575..626 CDD:295349 12/40 (30%)
cishXP_012816010.1 SH2_CIS 96..183 CDD:198285 28/86 (33%)
SOCS 226..266 CDD:383010 12/40 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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