DRSC/TRiP Functional Genomics Resources

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Protein Alignment Socs36E and socs9

DIOPT Version :9

Sequence 1:NP_523593.5 Gene:Socs36E / 35085 FlyBaseID:FBgn0041184 Length:737 Species:Drosophila melanogaster
Sequence 2:NP_001107273.1 Gene:socs9 / 100003691 ZFINID:ZDB-GENE-030131-4065 Length:497 Species:Danio rerio


Alignment Length:546 Identity:187/546 - (34%)
Similarity:248/546 - (45%) Gaps:128/546 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 RQCADGATDDDAAALSADSLNANGQIVNVTLEGGYGEVGVVTNRTAGS------SPEAAKTERQ- 158
            |..:||....|  .||||.|:              || |...::||.|      .|..::|.|| 
Zfish    52 RPLSDGFEYGD--LLSADLLS--------------GE-GAALSQTASSRPPLVPDPGTSRTLRQK 99

  Fly   159 ---------PVNNNGLAGSVGAAISTLQLHDNHGGNANCPLEADDDDDLDESLLRRRRSNSNSRS 214
                     |:..:.|  |...|.|..::|.:......||..|..|......|::          
Zfish   100 IQDAVGQCFPIKTHSL--SPAPAPSRRKIHLSELMLDRCPFPAGSDLAQKWYLIK---------- 152

  Fly   215 NIHHHHHHHQQQQQQQHEAEVVEYCEVLESLPVSNMLSAGTQHSSKPVSRSNNSNSCCRSRSSKA 279
                           ||.|.:  .|   .:.||...:||..:..|.|:...:....|        
Zfish   153 ---------------QHTAPL--EC---ANTPVLECVSAPLECVSAPLECVSAPLEC-------- 189

  Fly   280 LSMGAATSSASGSASTSVSTSTSSKRRCCKCKCRDAIRGLRDMLPSSSSSVSNKKDAAAVVAMVP 344
              :||.....|......||.....:....:.:.|.:|.  :.:.|..::.:...:..|.:..:..
Zfish   190 --VGAPVECVSAPVLECVSAPLEDEEDRLRERRRISIE--QGVEPPPNAQIHTFEVTAQINPLYK 250

  Fly   345 RKSRTA--------DRRSTPPTLGTSSGGSQRRMQSQRIRNSVAVPDASHHHHQLIIRITSPGFV 401
            ...:.|        |.|:|                                .|||:::...    
Zfish   251 LGPKLAHGMNELAGDERAT--------------------------------LHQLLLQTCL---- 279

  Fly   402 VESPNGGRVTVVTEPAPQSPQTPPRPRPLATVAPAGGAGHAGIGAARNMTVHSQIDFMHCLVPDL 466
                  ..:..|...||.|....|... :.|.||:.....:.........||:|||::|||||||
Zfish   280 ------DTLDEVAASAPVSVSAVPDVE-ICTAAPSVIRSESPKTQDYQHRVHTQIDYIHCLVPDL 337

  Fly   467 EKITNSSFYWGKMDRYEAEHLLEGKPEGTFLLRDSAQEEFLFSVTFRKYGRSLHARIEQSGHKFS 531
            .:|||.|.|||.|||||||.||||||||||||||||||::||||:||:|||||||||||..|.||
Zfish   338 LEITNLSCYWGVMDRYEAETLLEGKPEGTFLLRDSAQEDYLFSVSFRRYGRSLHARIEQWNHNFS 402

  Fly   532 FDCHDPCVFTAPTVTGLLEHYKDPACVMFFEPCLTIPLHRRQTFSLQQLSRATIVSNTSYDGINQ 596
            ||.|||.||.||||||||||||||...|||||.|:.|:||.|.||||::.||.|.|.:|||||..
Zfish   403 FDVHDPSVFHAPTVTGLLEHYKDPNSCMFFEPLLSNPIHRTQPFSLQRICRAVISSRSSYDGIGT 467

  Fly   597 MELPGRLKSYLKEYHYKQKLRVKPID 622
            :.||..||.:||||||||::|::.:|
Zfish   468 LPLPAALKEHLKEYHYKQRVRIRRLD 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Socs36ENP_523593.5 SH2 463..563 CDD:301589 80/99 (81%)
SOCS 575..626 CDD:295349 27/48 (56%)
socs9NP_001107273.1 RSB_motif 1..>58 CDD:292910 2/5 (40%)
SOCS <74..114 CDD:289383 8/39 (21%)
SH2 334..434 CDD:301589 80/99 (81%)
SOCS 443..493 CDD:295349 27/49 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170575795
Domainoid 1 1.000 99 1.000 Domainoid score I7025
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002657
OrthoInspector 1 1.000 - - otm24619
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10155
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5478
SonicParanoid 1 1.000 - - X2417
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
87.970

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