DRSC/TRiP Functional Genomics Resources

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Protein Alignment kel and gmcl1

DIOPT Version :9

Sequence 1:NP_476589.4 Gene:kel / 35084 FlyBaseID:FBgn0001301 Length:1477 Species:Drosophila melanogaster
Sequence 2:NP_001072725.1 Gene:gmcl1 / 780182 XenbaseID:XB-GENE-986541 Length:491 Species:Xenopus tropicalis


Alignment Length:411 Identity:96/411 - (23%)
Similarity:151/411 - (36%) Gaps:108/411 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 ESSQKHVQRPNGKERGTVGQYSNEQHTARSFD-----AMNEMRKQK----------------QLC 157
            ||.||.|.....::|    :.|.|.|.....|     .:|..|::|                :..
 Frog    12 ESKQKAVGSCEHRKR----KRSLECHCETETDEELENLLNTPRRKKLKSTSKYIYQTLFLNGENS 72

  Fly   158 DVILVADDVEIHAHRMVLASCSPYFYAMFT-SFEESRQARITLQ----SVDARALELLIDYVYTA 217
            |:.:.|...|...|::.|.. |.||.:||. |:.||....|.|:    ::||.||::....:|..
 Frog    73 DIKICALGQEWSLHKIYLCQ-SGYFSSMFCGSWRESSMNVIELEIPDHNIDAEALQVAFGSLYRD 136

  Fly   218 TVEVNEDNVQVLLTAANLLQLTDVRDACCDFLQTQLDASNCLGIREFADIHA-------CVE-LL 274
            .|.:....|..:|.||.:|||..:...|.:.::..:.|....|....|.::.       |:| ||
 Frog   137 DVLIKPSRVIAILAAACMLQLDGLIQQCGETMKETISAQTVCGYSSAAGVYGLDSVKKKCLEWLL 201

  Fly   275 NYAETYIEQHFNEVIQFDEFLNLS---HEQVISLIGNDRISVPNEERVYECVIAWLRYD-VP-MR 334
            |...|:        ...|.|..||   .||:|:  ..|.:.:..|..||..:..|:... || ..
 Frog   202 NNLMTH--------QSVDLFKELSIGVMEQLIA--SPDLLVMQVEMDVYTALKKWMFLQLVPSWN 256

  Fly   335 EQFTSLLMEHVRLPFLSKEYITQRVDKEILLEGNIV---CKN-----LIIEALTYHLLPTETKSA 391
            .....||.|       :..:.::| .|||  |.||.   |:.     .:...|....:.::..|.
 Frog   257 GSLKQLLPE-------ADAWFSKR-RKEI--EENITFLECEQGSPFMPVFRHLRLQYIISDLASV 311

  Fly   392 RTVPRKPVGMPKILLVIGGQAPKAIRSVEWY-DLREEKWYQ--AAEMPN---------------- 437
            |.|.|..: :|.                ||. .:.:::|:.  .||..|                
 Frog   312 RIVERDCL-VPS----------------EWLSSIYKQQWFTMLRAEQDNDMGPQEISKDDLENNS 359

  Fly   438 RRCRSGLSVLGDKVYAVGGFN 458
            .||...|:..||..:...|||
 Frog   360 MRCGRKLAKDGDYCWRWTGFN 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kelNP_476589.4 BTB 147..250 CDD:279045 32/123 (26%)
PHA03098 150..675 CDD:222983 85/370 (23%)
BACK 258..359 CDD:285009 25/113 (22%)
Kelch 405..449 CDD:128874 9/62 (15%)
KELCH repeat 439..482 CDD:276965 8/20 (40%)
Kelch 450..496 CDD:128874 3/9 (33%)
KELCH repeat 486..530 CDD:276965
Kelch 497..543 CDD:128874
KELCH repeat 533..580 CDD:276965
Kelch 544..592 CDD:128874
KELCH repeat 582..626 CDD:276965
Kelch 594..639 CDD:128874
KELCH repeat 629..674 CDD:276965
Kelch 640..687 CDD:128874
gmcl1NP_001072725.1 BTB_POZ_GCL 57..171 CDD:349614 29/114 (25%)
BACK_GCL 172..249 CDD:350570 21/86 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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