DRSC/TRiP Functional Genomics Resources

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Protein Alignment kel and Gmcl1

DIOPT Version :9

Sequence 1:NP_476589.4 Gene:kel / 35084 FlyBaseID:FBgn0001301 Length:1477 Species:Drosophila melanogaster
Sequence 2:NP_001029103.1 Gene:Gmcl1 / 312516 RGDID:1359265 Length:524 Species:Rattus norvegicus


Alignment Length:295 Identity:65/295 - (22%)
Similarity:113/295 - (38%) Gaps:60/295 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 NRLLQQQQQQHHHHQNPAAEGSGLERGSCLLRYASQNSLDESSQKHVQRPNGKER----GTVGQY 134
            :|:|:...:.......|.|.||.          ...::.::::......|.|::|    ||....
  Rat     6 SRVLRPAGRTEQPEPTPGAGGSA----------RRSDAGEDAAHGFCYCPGGRKRKRSSGTFCYC 60

  Fly   135 SNEQHTARSFD-------AMNEMRKQK----------------QLCDVILVADDVEIHAHRMVLA 176
            ..|..|....|       .:|..|::|                :..|:.:.|...|...|::.|.
  Rat    61 HPESETDEDEDEGDEQQRLLNTPRRKKLKSTSKYIYQTLFLNGENSDIKICALGEEWSLHKIYLC 125

  Fly   177 SCSPYFYAMFT-SFEESRQARITL----QSVDARALELLIDYVYTATVEVNEDNVQVLLTAANLL 236
            . |.||.:||: |::||....|.|    |::|..||::....:|...|.:....|..:|.||.:|
  Rat   126 Q-SGYFSSMFSGSWKESSMNIIELEIPDQNIDIEALQVAFGSLYRDDVLIKPSRVVAILAAACML 189

  Fly   237 QLTDVRDACCDFLQTQLDASNCLGIREFADIHA-------CVE-LLNYAETYIEQHFNEVIQFDE 293
            ||..:...|.:.::..:......|....|..:.       |:| |||...|:      :.::.  
  Rat   190 QLDGLIQQCGETMKETISVRTVCGYYTSAGTYGLDSVKKKCLEWLLNNLMTH------QSVEL-- 246

  Fly   294 FLNLSHEQVISLIGNDRISVPNEER-VYECVIAWL 327
            |..||...:..|||:..:.|...|. ||..:..|:
  Rat   247 FKELSINVMRQLIGSSNLFVMQVEMDVYTALKKWM 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kelNP_476589.4 BTB 147..250 CDD:279045 32/123 (26%)
PHA03098 150..675 CDD:222983 50/208 (24%)
BACK 258..359 CDD:285009 19/79 (24%)
Kelch 405..449 CDD:128874
KELCH repeat 439..482 CDD:276965
Kelch 450..496 CDD:128874
KELCH repeat 486..530 CDD:276965
Kelch 497..543 CDD:128874
KELCH repeat 533..580 CDD:276965
Kelch 544..592 CDD:128874
KELCH repeat 582..626 CDD:276965
Kelch 594..639 CDD:128874
KELCH repeat 629..674 CDD:276965
Kelch 640..687 CDD:128874
Gmcl1NP_001029103.1 BTB_POZ_GCL 91..205 CDD:349614 29/114 (25%)
BACK_GCL 206..283 CDD:350570 19/84 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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