DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kel and Klhl12

DIOPT Version :9

Sequence 1:NP_476589.4 Gene:kel / 35084 FlyBaseID:FBgn0001301 Length:1477 Species:Drosophila melanogaster
Sequence 2:XP_038946329.1 Gene:Klhl12 / 266772 RGDID:628717 Length:592 Species:Rattus norvegicus


Alignment Length:567 Identity:237/567 - (41%)
Similarity:338/567 - (59%) Gaps:29/567 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 HTARSFDAMNEMRKQKQLCDVILVADDVEIHAHRMVLASCSPYFYAMFTS--------FEESRQA 195
            |.....::||.:||...||||.|..:..:..|||:|||:||.||.|||||        ..|..:.
  Rat    32 HAKSILNSMNSLRKSNTLCDVTLRVEQKDFPAHRIVLAACSDYFCAMFTSEVNASLCYLSEKGKP 96

  Fly   196 RITLQSVDARALELLIDYVYTATVEVNEDNVQVLLTAANLLQLTDVRDACCDFLQTQLDASNCLG 260
            .:.:|.:.|..:|:|:|:|||.||.|..:|||.||.||.||||..|:.|||:||::|||.|||||
  Rat    97 YVDIQGLTASTMEILLDFVYTETVHVTVENVQELLPAACLLQLKGVKQACCEFLESQLDPSNCLG 161

  Fly   261 IREFADIHACVELLNYAETYIEQHFNEVIQFDEFLNLSHEQVISLIGNDRISVPNEERVYECVIA 325
            ||:||:.|.||:|:..||.:.::||.||:|.:||:.||..:|..||..|.|.|.:||.|:|.||.
  Rat   162 IRDFAETHNCVDLMQAAEVFSQKHFPEVVQHEEFILLSQGEVEKLIKCDEIQVDSEEPVFEAVIN 226

  Fly   326 WLRYDVPMREQFTSLLMEHVRLPFLSKEYITQRVDKEILLEGNIVCKNLIIEALTYHLLPTETKS 390
            |:::....||:....|:::||:|.|:..|||..:|.|..:..::.|::|:.||..:||.| |.:|
  Rat   227 WVKHAKKEREESLPDLLQYVRMPLLTPRYITDVIDAEPFIRCSLQCRDLVDEAKKFHLRP-ELRS 290

  Fly   391 ARTVP--RKPVGMPKILLVIGG----QAPKAIRSVEWYDLREEKWYQAAEMPN--RRCRSGLSV- 446
            ....|  |..:|..::|||:||    |:|  |..||.||.:.::|   :.:|:  |:.|...|| 
  Rat   291 QMQGPRTRARLGANEVLLVVGGFGSQQSP--IDVVEKYDPKTQEW---SFLPSITRKRRYVASVS 350

  Fly   447 LGDKVYAVGGFNGSLRVRTVDVYDPATDQ---WANCSNMEARRSTLGVAVLNGCIYAVGGFDGTT 508
            |.|::|.:||::|..|:.:|:..|...|:   |.:.:.|..||...|...|...||..|||||:.
  Rat   351 LHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSR 415

  Fly   509 GLSSAEMYDPKTDIWRFIASMSTRRSSVGVGVVHGLLYAVGGYDGFTRQCLSSVERYNPDTDTWV 573
            ..:|.|.|||..|.|..:..|.|.|...|:.|..|::|.:|||||.  ..|:|||:|:|.|..|.
  Rat   416 RHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGIIYCLGGYDGL--NILNSVEKYDPHTGHWT 478

  Fly   574 NVAEMSSRRSGAGVGVLNNILYAVGGHDGPMVRRSVEAYDCETNSWRSVADMSYCRRNAGVVAHD 638
            ||..|:::||||||.:||:.:|.|||.||.....|||||:..|:||.:|..|:..|...|.....
  Rat   479 NVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVLR 543

  Fly   639 GLLYVVGGDDGTSNLASVEVYCPDSDSWRILPALMTIGRSYAGVCMI 685
            |.||.:.|.||.|.|:|:|.|.|..|||.:: |.|...|..||||::
  Rat   544 GRLYAIAGYDGNSLLSSIECYDPIIDSWEVV-ASMGTQRCDAGVCVL 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kelNP_476589.4 BTB 147..250 CDD:279045 52/110 (47%)
PHA03098 150..675 CDD:222983 229/544 (42%)
BACK 258..359 CDD:285009 45/100 (45%)
Kelch 405..449 CDD:128874 19/50 (38%)
KELCH repeat 439..482 CDD:276965 14/46 (30%)
Kelch 450..496 CDD:128874 14/48 (29%)
KELCH repeat 486..530 CDD:276965 17/43 (40%)
Kelch 497..543 CDD:128874 19/45 (42%)
KELCH repeat 533..580 CDD:276965 21/46 (46%)
Kelch 544..592 CDD:128874 24/47 (51%)
KELCH repeat 582..626 CDD:276965 23/43 (53%)
Kelch 594..639 CDD:128874 18/44 (41%)
KELCH repeat 629..674 CDD:276965 18/44 (41%)
Kelch 640..687 CDD:128874 21/46 (46%)
Klhl12XP_038946329.1 BTB_POZ_KLHL12_C3IP1_DKIR 29..159 CDD:349551 58/126 (46%)
PHA03098 63..574 CDD:222983 220/518 (42%)
BACK_KLHL12 154..289 CDD:350527 59/135 (44%)
KELCH repeat 298..339 CDD:276965 16/45 (36%)
KELCH repeat 343..389 CDD:276965 14/45 (31%)
KELCH repeat 393..436 CDD:276965 17/42 (40%)
KELCH repeat 440..483 CDD:276965 20/44 (45%)
KELCH repeat 487..531 CDD:276965 23/43 (53%)
KELCH repeat 534..579 CDD:276965 19/45 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166350342
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4441
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D312716at33208
OrthoFinder 1 1.000 - - FOG0000036
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.750

Return to query results.
Submit another query.