DRSC/TRiP Functional Genomics Resources

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Protein Alignment kel and Gmcl1

DIOPT Version :9

Sequence 1:NP_476589.4 Gene:kel / 35084 FlyBaseID:FBgn0001301 Length:1477 Species:Drosophila melanogaster
Sequence 2:NP_035948.3 Gene:Gmcl1 / 23885 MGIID:1345156 Length:524 Species:Mus musculus


Alignment Length:303 Identity:68/303 - (22%)
Similarity:110/303 - (36%) Gaps:73/303 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 PPPGLGAAVGVAAMQQRNRLLQQQQQQHHHHQNPAAEGSG-----------LERGS---CLLRYA 107
            |.||.|.|.                     .::.|.|.:|           .:|.|   |.....
Mouse    20 PTPGAGGAA---------------------RRSDAGEDAGHSFCYCPGGRKRKRSSGTFCYCHPD 63

  Fly   108 SQNSLDESSQKHVQR----PNGKERGTVGQYSNEQHTARSFDAMNEMRKQKQLCDVILVADDVEI 168
            |:...||......||    |..|:..:..:|.   :.....:..|.        |:.:.|...|.
Mouse    64 SETDDDEDEGDEQQRLLNTPRRKKLKSTSKYI---YQTLFLNGENS--------DIKICALGEEW 117

  Fly   169 HAHRMVLASCSPYFYAMFT-SFEESRQARITL----QSVDARALELLIDYVYTATVEVNEDNVQV 228
            ..|::.|.. |.||.:||: |::||....|.|    |::|..||::....:|...|.:....|..
Mouse   118 SLHKIYLCQ-SGYFSSMFSGSWKESSMNIIELEIPDQNIDIEALQVAFGSLYRDDVLIKPSRVVA 181

  Fly   229 LLTAANLLQLTDVRDACCDFLQTQLDASNCLGIREFADIHA-------CVE-LLNYAETYIEQHF 285
            :|.||.:|||..:...|.:.::..:......|....|..:.       |:| |||...|:     
Mouse   182 ILAAACMLQLDGLIQQCGETMKETISVRTVCGYYTSAGTYGLDSVKKKCLEWLLNNLMTH----- 241

  Fly   286 NEVIQFDEFLNLSHEQVISLIGNDRISVPNEER-VYECVIAWL 327
             :.::.  |..||...:..|||:..:.|...|. ||..:..|:
Mouse   242 -QSVEL--FKELSINVMKQLIGSSNLFVMQVEMDVYTALKKWM 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kelNP_476589.4 BTB 147..250 CDD:279045 30/107 (28%)
PHA03098 150..675 CDD:222983 48/192 (25%)
BACK 258..359 CDD:285009 19/79 (24%)
Kelch 405..449 CDD:128874
KELCH repeat 439..482 CDD:276965
Kelch 450..496 CDD:128874
KELCH repeat 486..530 CDD:276965
Kelch 497..543 CDD:128874
KELCH repeat 533..580 CDD:276965
Kelch 544..592 CDD:128874
KELCH repeat 582..626 CDD:276965
Kelch 594..639 CDD:128874
KELCH repeat 629..674 CDD:276965
Kelch 640..687 CDD:128874
Gmcl1NP_035948.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..37 7/37 (19%)
Nuclear localization signal. /evidence=ECO:0000255 47..53 0/5 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 63..83 5/19 (26%)
Nuclear localization signal. /evidence=ECO:0000255 83..89 2/5 (40%)
BTB 96..203 CDD:279045 30/115 (26%)
BTB 107..206 CDD:197585 29/99 (29%)
BACK 211..>281 CDD:197943 18/77 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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