DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5758 and CG43333

DIOPT Version :10

Sequence 1:NP_609866.1 Gene:CG5758 / 35083 FlyBaseID:FBgn0032666 Length:625 Species:Drosophila melanogaster
Sequence 2:NP_788051.1 Gene:CG43333 / 34830 FlyBaseID:FBgn0263038 Length:1166 Species:Drosophila melanogaster


Alignment Length:428 Identity:92/428 - (21%)
Similarity:166/428 - (38%) Gaps:86/428 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 HKIVFRKLEKSHNNVWLL---------NGQQI----------LHKLRINENLMAIAIDGYLGDRK 203
            |.::|.. ..||.|...|         .|..:          .|...:.|.|..:|.:..|....
  Fly   783 HNLIFES-STSHVNAASLIRTTTSPIYGGSTVTVSPYLEGVSTHLPVVTERLSDVANNAELLPPI 846

  Fly   204 SPYSKRNIQETNNRYNDPQPLEQPNITNAHAKVEPVIKESKASPLMSFLANMKT-GTKVFQHFLS 267
            ..|:...:|||.|             |...|:..|......::|....|..:|| |......:|.
  Fly   847 PQYADALVQETEN-------------TEKAAQANPPTSSVLSNPSEDLLQILKTNGLFAMAKYLR 898

  Fly   268 KSNLTRIMDDNA-YTVLIPSDNAFQRW-------HPIDWGFYPFSVPEFTESVLRNHFLPMQRPL 324
            :|.|..|:::.. ||:.:|:|.||:..       ...:..|.  |.|.....:|.:|.:|  ...
  Fly   899 QSGLDSILNETGPYTIFVPTDKAFKNLLVQLGGPERAEEKFQ--SNPRLLSGLLLHHVIP--GAF 959

  Fly   325 RLADVRNMDEVVVTTMGGEDVVFHGQPTPTVNNVSI----MSDYNLS--NGNQVFIISEVLFVTE 383
            .:|.::  ||:...::.|..:        .||..::    .:|..|:  ||..|.:..:.:.:.:
  Fly   960 EIATLQ--DEMTGVSLAGTQL--------RVNQYNMHDQEWNDVTLTTINGAMVVLNKKDIKIPQ 1014

  Fly   384 AVVSKLHQMHKDKETPPLLAFPWFGAQFLSHSFLALERDPRFTQITRYLNSAEIAPHISG---AN 445
            .|.   |.:.:       :.||......|  ..|..:|:.||:...:.|.::.::..:..   ..
  Fly  1015 GVA---HAVDR-------VMFPLPVGDIL--QTLQSDREGRFSNFLKILYTSGLSEKLQSKGVKT 1067

  Fly   446 YTFFVPEDRAFEKQGFDKL----SDEVMASQRGVKMLLNHFVKGRLYNRDLRDNEVFETIGGGHI 506
            ||.|.|.|::|.:...|.|    :|:..|.|..:|    |.|.|.|::..:|..:|.:::..|..
  Fly  1068 YTVFAPVDKSFSELDSDTLEKLYNDKDTAEQFAMK----HIVPGALFSAGMRFYQVKDSLSTGKT 1128

  Fly   507 KITRNPGSNYTSVNNAQITESEVFVYNLGTMYYLDDIL 544
            .|.:...:....||:||:..|.:...| |.::.||.:|
  Fly  1129 VILQKTSAGKIKVNDAQMVTSNIPATN-GVIHALDGVL 1165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5758NP_609866.1 FAS1 281..380 CDD:214719 22/111 (20%)
FAS1 447..545 CDD:214719 29/102 (28%)
CG43333NP_788051.1 Activator_LAG-3 <302..373 CDD:151935
Fasciclin 889..1026 CDD:396845 30/160 (19%)
Fasciclin 1042..1165 CDD:396845 32/127 (25%)
Blue background indicates that the domain is not in the aligned region.

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