DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5758 and Tgfbi

DIOPT Version :10

Sequence 1:NP_609866.1 Gene:CG5758 / 35083 FlyBaseID:FBgn0032666 Length:625 Species:Drosophila melanogaster
Sequence 2:NP_446254.1 Gene:Tgfbi / 116487 RGDID:620017 Length:685 Species:Rattus norvegicus


Alignment Length:577 Identity:118/577 - (20%)
Similarity:217/577 - (37%) Gaps:127/577 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 VLLSLLPIAHVAAASATAADATAATAASTTSTGIDASLKNAKLIEAKVLPDLAILQRVNQEDEKW 78
            :|:.|||:|...:...|      .|.|....:.....|::::|...:..|::..:|:|...::|:
  Rat     3 LLVRLLPLALALSLGFT------GTLAGPAKSPYQLVLQHSRLRGRQHGPNVCAVQKVIGTNKKY 61

  Fly    79 ----QQVYRFIDDGFPVLELY----GYKPLPD-------LPYTLIVPKIDVRSIEKPRLKEFMLE 128
                :|.|:....|...:..|    ||:.:|.       ||.:.:...:.:......:|.....|
  Rat    62 FTNCKQWYQRKICGKSTVISYECCPGYEKVPGEKGCPAALPLSNLYETLGIVGSTTTQLYTDRTE 126

  Fly   129 HVVPGKIFDSYNGNGNSKEEEESFGNGNGHKIVFRKLEKSHNNVWLLNGQQILHKLRINENLMAI 193
            .:.|               |.|    |.|...:|    ...|..|.....::|..|..|.|:..:
  Rat   127 KLRP---------------EME----GPGSFTIF----APSNEAWSSLPAEVLDSLVSNVNIELL 168

  Fly   194 -AIDGYLGDRK-------------SPYSKRNIQETNNRYNDPQPLEQPNI-----TNAHAK---- 235
             |:..::.||:             |.|...|||    .::.|..:...|.     .:.||.    
  Rat   169 NALRYHMVDRRVLTDELKHGMALTSMYQNSNIQ----IHHYPNGIVTVNCARLLKADHHATNGVV 229

  Fly   236 --VEPVIKESKASPLMSFLANMKTGTKVFQHFLSKSNLTRIMD-DNAYTVLIPSDNAFQRWHPID 297
              ::.||  |..:..:..:..::...:..:..::.|.|..::: |..:|:|.|::.||:: .|.:
  Rat   230 HLIDKVI--STVTNNIQQIIEIEDTFETLRAAVAASGLNTVLEGDGQFTLLAPTNEAFEK-IPAE 291

  Fly   298 WGFYPFSVPEFTESVLRNHFLPMQRPLRLADVRNMDEVVVTTMGGEDVVFHGQPTPTVNNVSIMS 362
            ........||....:|.||.|....... |.|..|   .:.|:||           |...|....
  Rat   292 TLNRILGDPEALRDLLNNHILKTAMCAE-AIVAGM---AMETLGG-----------TTLEVGCSG 341

  Fly   363 DYNLSNGNQVFIISEVLFVTEAVVSKLHQMHKDKETPPLLAFPWFGAQFLSHSFLALERDPRFTQ 427
            |....||..|....::| .|..|:..:.::........||.             ||.|.|  .:.
  Rat   342 DMLTINGKAVISNKDIL-ATNGVIHFIDELLIPDSAKTLLE-------------LASESD--VST 390

  Fly   428 ITRYLNSAEIAPHISG-ANYTFFVPEDRAFEKQGFDKLSDEVMASQRGVKMLLNHFVKGRLYNRD 491
            ....|..|.::.|:|| ...||..|.:..| |.|..::..::..      :||||.|||:|.::.
  Rat   391 AIDLLRQAGLSTHLSGKEQLTFLAPLNSVF-KDGVPRIDGQMKT------LLLNHMVKGQLASKY 448

  Fly   492 LRDNEVFETIGGGHIKITRNPGSNYTSVNNAQITESEVFVYN----LGTMYYLDDIL 544
            |...:..:|:||..:::       :...|:..|..|.:..::    .||::.:|.:|
  Rat   449 LYSGQTLDTLGGKKLRV-------FVYRNSLCIENSCIAAHDKKGRYGTLFTMDRML 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5758NP_609866.1 FAS1 281..380 CDD:214719 24/98 (24%)
FAS1 447..545 CDD:214719 25/102 (25%)
TgfbiNP_446254.1 Fasciclin 133..236 CDD:396845 22/114 (19%)
Fasciclin 253..373 CDD:396845 30/136 (22%)
Fasciclin 386..500 CDD:396845 31/129 (24%)
FAS1 499..634 CDD:441906 118/577 (20%)

Return to query results.
Submit another query.