DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31741 and Cd36l1

DIOPT Version :10

Sequence 1:NP_724088.2 Gene:CG31741 / 35079 FlyBaseID:FBgn0051741 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_001102688.2 Gene:Cd36l1 / 499985 RGDID:1565355 Length:472 Species:Rattus norvegicus


Alignment Length:469 Identity:110/469 - (23%)
Similarity:197/469 - (42%) Gaps:48/469 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 GGLILAIGIFLASAWPAVSRQWIRSLLPLAPNSFIYNRWVTTPTPVYSTVFLFNWTNPGDLNTEG 83
            ||:::.:|..|.       .:.|:..:.|...:..:..||.|.|.||...::|:..||.::....
  Rat    23 GGILMPVGDLLI-------EKTIKREVVLEEGTIAFKNWVKTGTTVYRQFWIFDVQNPEEVAKNS 80

  Fly    84 VKPHFEQLGPYTFS-DFKVKEDLEWNQPQ---VTYFGKRTWHFLPEKSNGSLDD--------VVI 136
            .|...:|.||||:. .:..||::. ..|:   |::.......|.|..|.|:.:|        |..
  Rat    81 SKIKVKQRGPYTYRVRYLAKENIT-QDPKDSTVSFVQPNGAIFEPSLSVGTENDNFTVLNLAVAA 144

  Fly   137 APHFPTLTAALYSRRLRRILRKVMNFTLNREGGATHMTHTAGQWLFDGYYDHLLDFVEQLHSPLL 201
            |||..|          ...::.|:|..:.:...:...|.:..:.|: ||.|..|..|.      .
  Rat   145 APHIYT----------NSFVQGVLNSLIKKSKSSMFQTRSLKELLW-GYKDPFLSLVP------Y 192

  Fly   202 PVYDNTFGWFYERNNSKTAEGNFTLHTGRGDLSQLGDLLLWNGENTTGFYPGECGKVNGSTGELW 266
            |: ..|.|.||..||  |.:|.:.:..|:.::|::..:..:.|:....::...|..:||:....:
  Rat   193 PI-STTVGVFYPYNN--TVDGVYKVFNGKDNISKVAIIDTYKGKRNLSYWESYCDMINGTDAASF 254

  Fly   267 SPYRTWDQPTTIFLPDAARYLNLFPKENLTIDGIDVWRYESTNLTIDNGQLSPDTECFCLK---N 328
            .|:....:....|..|..|.:....:..:.:.||.|:|:........:...:||..|||.:   :
  Rat   255 PPFVEKSRTLRFFSSDICRSIYAVFESEVNLKGIPVYRFVLPANAFASPLQNPDNHCFCTEKVIS 319

  Fly   329 RECPRNGVLDYGPPAFNGPFYMSHPHFFLTDQMYRENTTGLQPEESEHGMYVIMEPTLGIPLSLR 393
            ..|...||||.|......|.|:|.|||........|...||.|.|.||..|:.:||..|..|...
  Rat   320 NNCTSYGVLDIGKCKEGKPVYISLPHFLHASPDVSEPIEGLNPNEDEHRTYLDVEPITGFTLQFA 384

  Fly   394 GQLMISTKVVRDEAIDLFKNVAYDHYAPLFTMRLHAELDEGLTKLLKLALNAAI--IGMYTGIGL 456
            .:|.::..|.....|:..||:...:..|:..:.....:.:...::.:..:...|  :|:   :.:
  Rat   385 KRLQVNILVKPARKIEALKNLKRPYIVPILWLNETGTIGDEKAEMFRNQVTGKIKLLGL---VEM 446

  Fly   457 VLLGMSIVVTGIFI 470
            ||||:.:|:...|:
  Rat   447 VLLGVGVVMFVAFM 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31741NP_724088.2 CD36 19..471 CDD:460076 110/469 (23%)
Cd36l1NP_001102688.2 None

Return to query results.
Submit another query.