DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31741 and scarb1

DIOPT Version :10

Sequence 1:NP_724088.2 Gene:CG31741 / 35079 FlyBaseID:FBgn0051741 Length:491 Species:Drosophila melanogaster
Sequence 2:XP_017213428.1 Gene:scarb1 / 387260 ZFINID:ZDB-GENE-031126-1 Length:511 Species:Danio rerio


Alignment Length:508 Identity:132/508 - (25%)
Similarity:227/508 - (44%) Gaps:60/508 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 MGGLILAIGIFLASAWPAVSRQWIRSLLPLAP-NSFIYNRWVTTPTPVYSTVFLFNWTNPGDLNT 81
            :||:.|..|..|....|.:....|...:.:.| |...|..|...|.|.:.:|:.|:..||.:: .
Zfish    14 LGGMALLFGTVLVFVGPIIIDDQIVKNVEINPKNDLSYTMWKDIPVPFFMSVYFFHIVNPDEI-L 77

  Fly    82 EGVKPHFEQLGPYTFSDFKVKEDLEWNQPQ-VTYFGKRTWHFLPEKSNGSLDDVVIAPHFPTLTA 145
            :|.:|...|.|||.:.:.:.|:::.:::.. |:|...|.:.|....|.|...|||..|:...|.|
Zfish    78 KGERPMVIQRGPYVYRENRWKDNITFHENHTVSYKEYRQYFFEESMSVGDESDVVTIPNMLVLGA 142

  Fly   146 ALYSRRLRRILRKVMNFTLNREGGATHMTHTAGQWLFDGYYDHLLDFVEQLHSPLLPVYDNTFGW 210
            ::....:...:|.:::.|.........:|...|:.:: ||...|:||:.:....:|| ....||.
Zfish   143 SVMMENMPFPVRLLLSTTFKTFNEGPFLTKPVGELMW-GYDSKLVDFLNKYLPGMLP-SSGKFGL 205

  Fly   211 FYERNNSKTAEGNFTLHTGRGDLSQLGDLLLWNG-ENTTGFYPGECGKVNGSTGELWSPYRTWDQ 274
            |.:.|||.|  |.||:.|||.|:.::..:..||| :|...:...:|..:||:.|::|.|:.|.:.
Zfish   206 FADFNNSNT--GLFTIFTGRDDIRKVHMVDSWNGLKNVDYWRSDQCNMINGTAGQMWPPFMTKET 268

  Fly   275 PTTIFLPDAARYLNLFPKENLTIDGIDVWRYESTNLTIDNGQLSPDTECFCLKNRECPRNGVLDY 339
            ....:.|||.|.:.|..:..|...||.|:||.|......||...|..|.||    .|.::|:|:.
Zfish   269 TMPFYSPDACRSMELVYQRPLVSSGIPVYRYVSPKTLFANGADFPPNEGFC----PCRQSGLLNV 329

  Fly   340 GPPAFNGPFYMSHPHFFLTDQMYRENTTGLQPEESEHGMYVIMEPTLGIPLSLRGQLMISTKVVR 404
            .......|.::|.|||:..|....:..:||.|.|.|||:::.:.|..|:|:::..:|.::..:.:
Zfish   330 SSCRHGSPTFISQPHFYNADPQLLDTVSGLSPSEDEHGLFIDIHPETGVPVNVSVRLQLNLFLKK 394

  Fly   405 DEAIDLFKNVA-------------YDHYAPLFTMRLHAELDEGLTKLLKLALNAAIIGMYTGIGL 456
            ...|....|:|             |.....|.|.|.:..:   |.|:::          |.....
Zfish   395 VSGISETGNIAEVVMPMLWFEESGYIDGPVLHTFRTNLVV---LPKVME----------YMQYIF 446

  Fly   457 VLLGMSIVVTGI--FITKKHKW--------------------HSEQRPDKHLQ 487
            :.||::.::|.:  |:|.|..|                    ||:|.|....|
Zfish   447 IALGLAAILTAVILFLTDKKVWKKSSQTLTQAVSTRVYDNVNHSKQHPANETQ 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31741NP_724088.2 CD36 19..471 CDD:460076 124/469 (26%)
scarb1XP_017213428.1 CD36 13..461 CDD:460076 123/468 (26%)

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