DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31741 and Scarb1

DIOPT Version :10

Sequence 1:NP_724088.2 Gene:CG31741 / 35079 FlyBaseID:FBgn0051741 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_001192012.1 Gene:Scarb1 / 20778 MGIID:893578 Length:520 Species:Mus musculus


Alignment Length:399 Identity:116/399 - (29%)
Similarity:200/399 - (50%) Gaps:17/399 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 WVF----SMGGLILAIGIFLASAWPAVSRQWIRSLLPLAPNSFIYNRWVTTPTPVYSTVFLFNWT 74
            ||.    ::|.|..|:|:.:....|::.:|.:...:.:.|:|..:..|...|.|.|.:|:.|...
Mouse     9 WVALGLGALGLLFAALGVVMILMVPSLIKQQVLKNVRIDPSSLSFGMWKEIPVPFYLSVYFFEVV 73

  Fly    75 NPGDLNTEGVKPHFEQLGPYTFSDFKVKEDLEWN-QPQVTYFGKRTWHFLPEKSNGSLDDVVIAP 138
            ||.:: ..|.||...:.|||.:.:|:.|.::.:| ...|::...|:.||.|:||:||..|.::.|
Mouse    74 NPNEV-LNGQKPVVRERGPYVYREFRQKVNITFNDNDTVSFVENRSLHFQPDKSHGSESDYIVLP 137

  Fly   139 HFPTLTAALYSRRLRRILRKVMNFTLNREGGATHMTHTAGQWLFDGYYDHLLDFVEQLHSPLLPV 203
            :...|..::........|:.:|...|...|....|..|.|:.|: ||.|..:.|:......:||:
Mouse   138 NILVLGGSILMESKPVSLKLMMTLALVTMGQRAFMNRTVGEILW-GYDDPFVHFLNTYLPDMLPI 201

  Fly   204 YDNTFGWFYERNNSKTAEGNFTLHTGRGDLSQLGDLLLWNGENTTGFYPGE-CGKVNGSTGELWS 267
             ...||.|...|||.:  |.||:.||..:.|::..:..|||.:...::..| |..:||::|::|:
Mouse   202 -KGKFGLFVGMNNSNS--GVFTVFTGVQNFSRIHLVDKWNGLSKIDYWHSEQCNMINGTSGQMWA 263

  Fly   268 PYRTWDQPTTIFLPDAARYLNLFPKENLTIDGIDVWRYESTNLTIDNGQLSPDTECFCLKNRECP 332
            |:.|.:.....|.|:|.|.:.|...|:...:||..:|:.:.:....||.:.|..|.||    .|.
Mouse   264 PFMTPESSLEFFSPEACRSMKLTYNESRVFEGIPTYRFTAPDTLFANGSVYPPNEGFC----PCR 324

  Fly   333 RNGVLDYGPPAFNGPFYMSHPHFFLTDQMYRENTTGLQPEESEHGMYVIMEPTLGIPL--SLRGQ 395
            .:|:.:.....|..|.::|||||:..|.:..|...||.|...||.:::.:.|..|||:  |::.|
Mouse   325 ESGIQNVSTCRFGAPLFLSHPHFYNADPVLSEAVLGLNPNPKEHSLFLDIHPVTGIPMNCSVKMQ 389

  Fly   396 LMISTKVVR 404
            |.:..|.|:
Mouse   390 LSLYIKSVK 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31741NP_724088.2 CD36 19..471 CDD:460076 114/390 (29%)
Scarb1NP_001192012.1 CD36 26..447 CDD:460076 110/382 (29%)

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