DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31741 and scarb2a

DIOPT Version :10

Sequence 1:NP_724088.2 Gene:CG31741 / 35079 FlyBaseID:FBgn0051741 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_775366.1 Gene:scarb2a / 192340 ZFINID:ZDB-GENE-020419-29 Length:531 Species:Danio rerio


Alignment Length:464 Identity:121/464 - (26%)
Similarity:212/464 - (45%) Gaps:22/464 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 LILAIGIFLASAWPAVSRQWIRSLLPLAPNSFIYNRWVTTPTPVYSTVFLFNWTNPGDLNTEGVK 85
            |||.|.:.||..:..:.::.|:..:.||.||.:.:.|:..|.|||...|.||.|||.:......|
Zfish    19 LILGIALLLAQVFQTMIQERIKKEITLAENSRVLDGWINPPPPVYMQYFFFNVTNPDEFLAGKEK 83

  Fly    86 PHFEQLGPYTFSDFKVKEDLEW--NQPQVTYFGKRTWHFLPEKSNGSLD-DVVIAPHFPTLTAAL 147
            ....|:||||:.:::.:|::.:  |..::.....:::.||...|.|..: |.|...:.|.:....
Zfish    84 AKVTQMGPYTYREYRPRENVTYLENGTKIFATNPKSFVFLRNMSAGDPEVDRVTTVNIPMIAVMN 148

  Fly   148 YSRRLRRILRKVMNFTLNREGGATHMTHTAGQWLFDGYYDHLLDFVEQLHSPLLPVYDNTFGWFY 212
            ........:|..::..:...|....|..|..:.|: |:.|.||   .:||: :.|..|..||..|
Zfish   149 ELNSYSFFVRTAVSMYMGSMGMGLFMNRTVHEILW-GFKDPLL---TKLHA-MRPEVDEHFGLMY 208

  Fly   213 ERNNSKTAEGNFTLHTGRGDLSQLGDLLLWNGENTTGFY-PGECGKVNGSTGELWSPYRTWDQPT 276
            .:|.  |.||.|..|||..:....|.:..|||.:...:: ..:...:||:.|.::..:.:..:..
Zfish   209 NKNG--THEGEFVFHTGEKNYMNYGKIDTWNGISQMNWWSSNQSNMINGTDGSVFHTFLSRKELL 271

  Fly   277 TIFLPDAARYLNLFPKENLTIDGIDVWRYESTNLTIDNGQLSPDTECFCLKNRECPRNGVLDYGP 341
            .||..|..|.::|....::.:.||..:|:...:..:.....:|....||:...:|...|||....
Zfish   272 YIFAADLCRSIHLGYVRDMEVKGIPAFRFAPPSDVLAPPDENPANAGFCVPAGDCLGKGVLKVSV 336

  Fly   342 PAFNGPFYMSHPHFFLTDQMYRENTTGLQPEESEHGMYVIMEPTLGIPLSL--RGQLMISTKVVR 404
            .....|..:|.|||:..|:.|.....|:.|.|.||..|:.:.||.|:|:..  |.||.|..|.||
Zfish   337 CRQGAPIVVSFPHFYQADERYINAIEGMNPNEEEHETYLDINPTTGVPIRACKRAQLNIILKRVR 401

  Fly   405 DEAIDLFKNVAY--DHYAPLFTMRLHAEL-DEGLTKLLKLALNAAIIGMYTGIGLVLLGMSIVVT 466
            .     |.|..:  :...|:..:...|.: ||...::..|.|...::..:..| ::.||:.::|.
Zfish   402 G-----FPNTKFLNETIFPIMYVNETATIDDESAAQMRMLLLIVTVVSNFPVI-ILALGVILLVV 460

  Fly   467 GIFITKKHK 475
            .||:..:::
Zfish   461 LIFLVCRNR 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31741NP_724088.2 CD36 19..471 CDD:460076 121/458 (26%)
scarb2aNP_775366.1 CD36 30..465 CDD:460076 115/447 (26%)

Return to query results.
Submit another query.