DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arr1 and arr3a

DIOPT Version :9

Sequence 1:NP_001246073.1 Gene:Arr1 / 35078 FlyBaseID:FBgn0000120 Length:364 Species:Drosophila melanogaster
Sequence 2:NP_001002405.1 Gene:arr3a / 436678 ZFINID:ZDB-GENE-040718-102 Length:357 Species:Danio rerio


Alignment Length:355 Identity:137/355 - (38%)
Similarity:212/355 - (59%) Gaps:13/355 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KVFKKCSPNNMITLYMNRRDFVDSVTQVEPIDGIIVLDDEYVRQNRKIFVQLVCNFRYGREDDEM 70
            ||:||.|.|..:|||:.:||:||.|..|:.::|.:.:|...: .::|::|||.|.|||||||.::
Zfish     4 KVYKKTSGNGQLTLYLGKRDYVDHVDVVDAVEGAVKIDPADL-GDKKVWVQLACAFRYGREDLDV 67

  Fly    71 IGLRFQKELTLVSQQVCPPQKQDIQLTKMQERLLKKLGSNAYPFVMQMPPSSPASVVLQQKASDE 135
            |||.|:|::.:...|:.|.......||:|...||||.|...:||...:|.:.|.||.||....|:
Zfish    68 IGLSFRKDIWIQHIQLYPEAGHKPTLTEMHNTLLKKAGEQGHPFTFNIPTNLPCSVTLQPGPDDK 132

  Fly   136 SQPCGVQYFVKIF---TGDSDCDRSHRRSTINLGIRKVQYAPTKQGIQPCTVVRKDFLLSPGELE 197
            .:.|||.:.||.:   :.|...::..::.|..|.|||:|:||...|......:.|.|::|...:.
Zfish   133 GKACGVDFEVKAYVAKSADDPDEKVDKKDTCRLVIRKIQFAPDNTGSGQKAELCKSFMMSDKPVL 197

  Fly   198 LEVTLDKQLYHHGEKISVNICVRNNSNKVVKKIKAMVQQGVDVVLFQNGQFRNTIAFMETSEGCP 262
            ||.:|:|::|:||:.|.|||.::|.:|||||:|:..|.|..||||:...::...:...|..|...
Zfish   198 LEASLEKEIYYHGDPIPVNIKIKNETNKVVKRIRVTVDQTTDVVLYSADKYTKNVLTEEFGETVE 262

  Fly   263 LNPGSSLQKVMYLVPTLVANCDRAGIAVEGDIKRKDTALASTTLIASQDARDAFGIIVSYAVKVK 327
            .|  ||.:|.:.:.|.|..|.::.|:|::|.:|.:||.|||||:|.:...::..||:|||.:||.
Zfish   263 AN--SSFEKSLDITPLLANNKEKRGLALDGRLKDEDTNLASTTIIRTGMDKEMLGILVSYKIKVN 325

  Fly   328 LFL---GALGG----ELCAELPFILMHPKP 350
            |.:   |.|||    ::..|||..||||||
Zfish   326 LMVSGGGLLGGLTASDVTVELPLTLMHPKP 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arr1NP_001246073.1 Arrestin_N 17..173 CDD:304627 59/158 (37%)
Arrestin_C 192..350 CDD:214976 65/164 (40%)
arr3aNP_001002405.1 Arrestin_N 36..173 CDD:304627 50/137 (36%)
Arrestin_C 192..355 CDD:214976 65/164 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3865
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52566
OrthoDB 1 1.010 - - D340461at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11792
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.930

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