DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arr1 and Arrb1

DIOPT Version :10

Sequence 1:NP_476681.1 Gene:Arr1 / 35078 FlyBaseID:FBgn0000120 Length:364 Species:Drosophila melanogaster
Sequence 2:XP_038957542.1 Gene:Arrb1 / 25387 RGDID:2156 Length:481 Species:Rattus norvegicus


Alignment Length:365 Identity:164/365 - (44%)
Similarity:237/365 - (64%) Gaps:19/365 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KVFKKCSPNNMITLYMNRRDFVDSVTQVEPIDGIIVLDDEYVRQNR---------KIFVQLVCNF 61
            :||||.|||..:|:|:.:|||||.:..|:|:||::::|.||:::.|         .::|.|.|.|
  Rat    60 RVFKKASPNGKLTVYLGKRDFVDHIDLVDPVDGVVLVDPEYLKERRGPSSVPLLLTVYVTLTCAF 124

  Fly    62 RYGREDDEMIGLRFQKELTLVSQQVCPPQKQDIQ-LTKMQERLLKKLGSNAYPFVMQMPPSSPAS 125
            ||||||.:::||.|:|:|.:.:.|..||..:|.: ||::||||:||||.:||||..::||:.|.|
  Rat   125 RYGREDLDVLGLTFRKDLFVANVQSFPPAPEDKKPLTRLQERLIKKLGEHAYPFTFEIPPNLPCS 189

  Fly   126 VVLQQKASDESQPCGVQYFVKIFTGDSDCDRSHRRSTINLGIRKVQYAPTKQGIQPCTVVRKDFL 190
            |.||....|..:.|||.|.||.|..::..::.|:|:::.|.||||||||.:.|.||.....:.||
  Rat   190 VTLQPGPEDTGKACGVDYEVKAFCAENLEEKIHKRNSVRLVIRKVQYAPERPGPQPTAETTRQFL 254

  Fly   191 LSPGELELEVTLDKQLYHHGEKISVNICVRNNSNKVVKKIKAMVQQGVDVVLFQNGQFRNTIAFM 255
            :|...|.||.:|||::|:|||.||||:.|.||:||.|||||..|:|..|:.||...|::..:|..
  Rat   255 MSDKPLHLEASLDKEIYYHGEPISVNVHVTNNTNKTVKKIKISVRQYADICLFNTAQYKCPVAME 319

  Fly   256 ETSEGCPLNPGSSLQKVMYLVPTLVANCDRAGIAVEGDIKRKDTALASTTLIASQDARDAFGIIV 320
            |..:  .:.|.|:..||..|.|.|..|.::.|:|::|.:|.:||.|||:||:.....|:..||||
  Rat   320 EADD--TVAPSSTFCKVYTLTPFLANNREKRGLALDGKLKHEDTNLASSTLLREGANREILGIIV 382

  Fly   321 SYAVKVKLFL--GALGGELCA-----ELPFILMHPKPSRK 353
            ||.|||||.:  |.|.|:|.:     ||||.||||||..:
  Rat   383 SYKVKVKLVVSRGGLLGDLASSDVAVELPFTLMHPKPKEE 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arr1NP_476681.1 Arrestin_N 17..173 CDD:451447 71/165 (43%)
Arrestin_C 192..350 CDD:214976 76/164 (46%)
Arrb1XP_038957542.1 Arrestin_N 71..237 CDD:425619 71/165 (43%)
Arrestin_C 256..419 CDD:214976 76/164 (46%)

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