| Sequence 1: | NP_001286024.1 | Gene: | rdo / 35077 | FlyBaseID: | FBgn0243486 | Length: | 757 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_172668.1 | Gene: | LRX1 / 837756 | AraportID: | AT1G12040 | Length: | 744 | Species: | Arabidopsis thaliana |
| Alignment Length: | 626 | Identity: | 115/626 - (18%) |
|---|---|---|---|
| Similarity: | 194/626 - (30%) | Gaps: | 222/626 - (35%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 172 RNFF----MLSRLKYLDLSGNPLQDLQPDVFRDVPELKVLKCRNCQLKKI--------------- 217
Fly 218 ----------------------NPQMYNLLPLLSELDLGRNEFKFLDKDEFRDVKRLTKVLLDGN 260
Fly 261 QLSVVVDQLFRMQKSLNHLDLSYNR-LAKVPNDSFLQLTNLTFLDLSYNKLVRLEPQSIRSLSNL 324
Fly 325 LTLNISGNVLMDLREMRETFEPLIYYFFLTCSKLFFQLIPQ------LTHLAIADM---GTMPVG 380
Fly 381 LLHPFKQLRYLNISGNSLNNTALEVIDPCRELEFLDLSRNQLHGISEDTVLRIQGIRNVRLDNN- 444
Fly 445 ------PLICDECHMGKLINVVRQLQWKWDTYPICFLPKSLRGAEINNLDINGLHTCLTFITDEE 503
Fly 504 QNAASTSYNFLEHGGLNTLAILGGIIFVLIAVIILSLVACFSKNRARYYTREDHLNGSESKCLEK 568
Fly 569 NLEATTITTLGNGSSPTTTTTLTLATSPAAPNGPKTNGQGLSLSPANGSTPVHGISDDKGKEINF 633
Fly 634 TFPVDDRVCTIDE---LMPSPPPPPQQHPHPNMGSLMYSVSHSPNSATTLAAVAAAATVIPPGAP 695
Fly 696 SHSSM----------PTPTPTPAEAVVVVLPPPPL----PP 722 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| rdo | NP_001286024.1 | leucine-rich repeat | 84..107 | CDD:275380 | |
| leucine-rich repeat | 108..131 | CDD:275380 | |||
| LRR_8 | 131..190 | CDD:290566 | 5/21 (24%) | ||
| leucine-rich repeat | 132..155 | CDD:275380 | |||
| LRR_RI | 151..422 | CDD:238064 | 61/300 (20%) | ||
| leucine-rich repeat | 156..179 | CDD:275380 | 3/10 (30%) | ||
| LRR_8 | 178..262 | CDD:290566 | 17/120 (14%) | ||
| leucine-rich repeat | 180..203 | CDD:275380 | 4/22 (18%) | ||
| leucine-rich repeat | 204..251 | CDD:275380 | 10/83 (12%) | ||
| leucine-rich repeat | 252..275 | CDD:275380 | 4/22 (18%) | ||
| LRR_8 | 274..334 | CDD:290566 | 20/60 (33%) | ||
| leucine-rich repeat | 276..299 | CDD:275380 | 11/23 (48%) | ||
| LRR_4 | 298..342 | CDD:289563 | 8/43 (19%) | ||
| leucine-rich repeat | 300..323 | CDD:275380 | 8/22 (36%) | ||
| leucine-rich repeat | 388..411 | CDD:275380 | 5/22 (23%) | ||
| LRX1 | NP_172668.1 | PLN00113 | 58..>337 | CDD:215061 | 61/315 (19%) |
| leucine-rich repeat | 98..120 | CDD:275380 | 3/21 (14%) | ||
| leucine-rich repeat | 149..172 | CDD:275380 | 11/23 (48%) | ||
| leucine-rich repeat | 173..193 | CDD:275380 | 8/44 (18%) | ||
| leucine-rich repeat | 194..220 | CDD:275380 | 5/26 (19%) | ||
| leucine-rich repeat | 221..242 | CDD:275380 | 5/20 (25%) | ||
| leucine-rich repeat | 244..267 | CDD:275380 | 5/22 (23%) | ||
| leucine-rich repeat | 268..291 | CDD:275380 | 5/22 (23%) | ||
| leucine-rich repeat | 292..315 | CDD:275380 | 5/25 (20%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 1 | 1.050 | 98 | 1.000 | Inparanoid score | I2198 |
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 1.050 | |||||