| Sequence 1: | NP_001286024.1 | Gene: | rdo / 35077 | FlyBaseID: | FBgn0243486 | Length: | 757 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_189091.1 | Gene: | AT3G24480 / 822038 | AraportID: | AT3G24480 | Length: | 494 | Species: | Arabidopsis thaliana |
| Alignment Length: | 617 | Identity: | 130/617 - (21%) |
|---|---|---|---|
| Similarity: | 195/617 - (31%) | Gaps: | 217/617 - (35%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 161 LADNSIVELVQRNFFMLSRLKYLDLSGNPLQDLQPDVFRDVPELK----VLKC---------RNC 212
Fly 213 QLKKINPQMYNL-------------LPLLSELDLGRNEFKFLDKDEFRDVKRLTKVLLDGNQLSV 264
Fly 265 VVDQLFRMQKSLNHLDLSYNRLA-KVPNDSFLQLTNLTFLDLSYNKLVRLEPQSIRSLSNLLTLN 328
Fly 329 ISGNVLMDLREMRETFEPLIYYFFLTCSKLFFQLIPQLTHLAIADMGTMPVGLLHPFKQLRYLNI 393
Fly 394 SGNSLNNTALEVIDPCRELEFLDLSRNQLHGISEDTVLRIQGIRNVRLDNNPL-ICDECHMGKLI 457
Fly 458 NVVRQLQWKWDTYPICF------LPKSLRG-AEINNLDINGLHTCLTFITDEEQNAAST------ 509
Fly 510 -----SYNFLEHGGLNTLAILGGIIFVLIAVIILSLVACFSKNRARYYTREDHLNGSESKCLEKN 569
Fly 570 LEA------TTITTLGNGSSPTTTTTLTLATSPAAPNGPKTNGQGLSLSPANGSTPVHGISDDKG 628
Fly 629 KEINFTFPVDDRVCTIDELMPSPPPPPQQHPHPNMGSLMYSVSHSPNSATTLAAVAAAATVIPPG 693
Fly 694 APSHSSMPTPTP------TPAEAVVVVLPPPP 719 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| rdo | NP_001286024.1 | leucine-rich repeat | 84..107 | CDD:275380 | |
| leucine-rich repeat | 108..131 | CDD:275380 | |||
| LRR_8 | 131..190 | CDD:290566 | 8/28 (29%) | ||
| leucine-rich repeat | 132..155 | CDD:275380 | |||
| LRR_RI | 151..422 | CDD:238064 | 57/287 (20%) | ||
| leucine-rich repeat | 156..179 | CDD:275380 | 5/17 (29%) | ||
| LRR_8 | 178..262 | CDD:290566 | 16/109 (15%) | ||
| leucine-rich repeat | 180..203 | CDD:275380 | 4/22 (18%) | ||
| leucine-rich repeat | 204..251 | CDD:275380 | 8/72 (11%) | ||
| leucine-rich repeat | 252..275 | CDD:275380 | 4/22 (18%) | ||
| LRR_8 | 274..334 | CDD:290566 | 25/60 (42%) | ||
| leucine-rich repeat | 276..299 | CDD:275380 | 12/23 (52%) | ||
| LRR_4 | 298..342 | CDD:289563 | 12/43 (28%) | ||
| leucine-rich repeat | 300..323 | CDD:275380 | 8/22 (36%) | ||
| leucine-rich repeat | 388..411 | CDD:275380 | 0/22 (0%) | ||
| AT3G24480 | NP_189091.1 | LRRNT_2 | 80..113 | CDD:285463 | 4/32 (13%) |
| LRR_8 | 148..204 | CDD:290566 | 22/56 (39%) | ||
| leucine-rich repeat | 148..171 | CDD:275380 | 4/22 (18%) | ||
| leucine-rich repeat | 172..195 | CDD:275380 | 12/23 (52%) | ||
| leucine-rich repeat | 196..218 | CDD:275380 | 8/22 (36%) | ||
| leucine-rich repeat | 219..239 | CDD:275380 | 7/51 (14%) | ||
| leucine-rich repeat | 242..265 | CDD:275380 | 5/55 (9%) | ||
| leucine-rich repeat | 266..289 | CDD:275380 | 6/22 (27%) | ||
| leucine-rich repeat | 290..313 | CDD:275380 | 6/30 (20%) | ||
| leucine-rich repeat | 314..337 | CDD:275380 | 5/29 (17%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 1 | 1.050 | 98 | 1.000 | Inparanoid score | I2198 |
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 1.050 | |||||